Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 AAT1YKL106W 1356 nt7□□□□□ -1.29
CDC39P25655 KRR1YCL059C 951 nt7□□□□□ -1.29
CDC39P25655 GDH1YOR375C 1365 nt6.99□□□□□ -1.29
CDC39P25655 HXT11YOL156W 1704 nt6.98□□□□□ -1.29
CDC39P25655 TMS1YDR105C 1422 nt6.98□□□□□ -1.29
CDC39P25655 BXI1YNL305C 894 nt6.98□□□□□ -1.29
CDC39P25655 BAP3YDR046C 1815 nt6.98□□□□□ -1.29
CDC39P25655 YIR035CYIR035C 765 nt6.98□□□□□ -1.29
CDC39P25655 THI6YPL214C 1623 nt6.97□□□□□ -1.29
CDC39P25655 DUR3YHL016C 2208 nt6.97□□□□□ -1.29
CDC39P25655 RNA170RNA170 169 nt6.95□□□□□ -1.3
CDC39P25655 TAD2YJL035C 753 nt6.95□□□□□ -1.3
CDC39P25655 HIS3YOR202W 663 nt6.95□□□□□ -1.3
CDC39P25655 snR86snR86 1004 nt6.94□□□□□ -1.3
CDC39P25655 YPR084WYPR084W 1371 nt6.94□□□□□ -1.3
CDC39P25655 TRP2YER090W 1524 nt6.94□□□□□ -1.3
CDC39P25655 CHS7YHR142W 951 nt6.94□□□□□ -1.3
CDC39P25655 MET2YNL277W 1461 nt6.93□□□□□ -1.3
CDC39P25655 tD(GUC)BtD(GUC)B 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)DtD(GUC)D 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)G1tD(GUC)G1 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)G2tD(GUC)G2 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)I1tD(GUC)I1 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)I2tD(GUC)I2 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)J1tD(GUC)J1 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)J2tD(GUC)J2 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)J3tD(GUC)J3 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)J4tD(GUC)J4 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)KtD(GUC)K 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)L1tD(GUC)L1 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)L2tD(GUC)L2 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)MtD(GUC)M 72 nt6.92□□□□□ -1.3
CDC39P25655 tD(GUC)OtD(GUC)O 72 nt6.92□□□□□ -1.3
CDC39P25655 YLR460CYLR460C 1131 nt6.92□□□□□ -1.3
CDC39P25655 YJL043WYJL043W 774 nt6.92□□□□□ -1.3
CDC39P25655 ABP1YCR088W 1779 nt6.92□□□□□ -1.3
CDC39P25655 MEP1YGR121C 1479 nt6.91□□□□□ -1.3
CDC39P25655 BUD31YCR063W 474 nt6.9□□□□□ -1.3
CDC39P25655 PUP3YER094C 618 nt6.9□□□□□ -1.3
CDC39P25655 RRT6YGL146C 936 nt6.89□□□□□ -1.31
CDC39P25655 LRO1YNR008W 1986 nt6.88□□□□□ -1.31
CDC39P25655 YPT31YER031C 672 nt6.88□□□□□ -1.31
CDC39P25655 CAK1YFL029C 1107 nt6.88□□□□□ -1.31
CDC39P25655 YLR358CYLR358C 564 nt6.88□□□□□ -1.31
CDC39P25655 YML079WYML079W 606 nt6.88□□□□□ -1.31
CDC39P25655 LEA1YPL213W 717 nt6.88□□□□□ -1.31
CDC39P25655 URA8YJR103W 1737 nt6.87□□□□□ -1.31
CDC39P25655 DIP5YPL265W 1827 nt6.87□□□□□ -1.31
CDC39P25655 EHT1YBR177C 1356 nt6.87□□□□□ -1.31
CDC39P25655 YFR020WYFR020W 699 nt6.86□□□□□ -1.31
CDC39P25655 TDH1YJL052W 999 nt6.86□□□□□ -1.31
CDC39P25655 HAC1YFL031W 717 nt6.86□□□□□ -1.31
CDC39P25655 SHC1YER096W 1539 nt6.86□□□□□ -1.31
CDC39P25655 PDC6YGR087C 1692 nt6.86□□□□□ -1.31
CDC39P25655 YIL168WYIL168W 384 nt6.84□□□□□ -1.31
CDC39P25655 VPS65YLR322W 315 nt6.84□□□□□ -1.31
CDC39P25655 SRM1YGL097W 1449 nt6.83□□□□□ -1.32
CDC39P25655 OCH1YGL038C 1443 nt6.83□□□□□ -1.32
CDC39P25655 PIH1YHR034C 1035 nt6.83□□□□□ -1.32
CDC39P25655 APT1YML022W 564 nt6.83□□□□□ -1.32
CDC39P25655 PET494YNR045W 1470 nt6.83□□□□□ -1.32
CDC39P25655 OLA1YBR025C 1185 nt6.82□□□□□ -1.32
CDC39P25655 YBR056WYBR056W 1506 nt6.82□□□□□ -1.32
CDC39P25655 YJL009WYJL009W 327 nt6.82□□□□□ -1.32
CDC39P25655 MDL2YPL270W 2322 nt6.81□□□□□ -1.32
CDC39P25655 HXT8YJL214W 1710 nt6.81□□□□□ -1.32
CDC39P25655 RSM7YJR113C 744 nt6.8□□□□□ -1.32
CDC39P25655 GTB1YDR221W 2109 nt6.8□□□□□ -1.32
CDC39P25655 NCA3YJL116C 1014 nt6.8□□□□□ -1.32
CDC39P25655 INO1YJL153C 1602 nt6.79□□□□□ -1.32
CDC39P25655 MRN1YPL184C 1839 nt6.79□□□□□ -1.32
CDC39P25655 INM1YHR046C 888 nt6.79□□□□□ -1.32
CDC39P25655 WSC4YHL028W 1818 nt6.78□□□□□ -1.32
CDC39P25655 FTH1YBR207W 1398 nt6.78□□□□□ -1.32
CDC39P25655 BUB2YMR055C 921 nt6.77□□□□□ -1.33
CDC39P25655 ATP2YJR121W 1536 nt6.77□□□□□ -1.33
CDC39P25655 ALG7YBR243C 1347 nt6.77□□□□□ -1.33
CDC39P25655 TDA4YJR116W 840 nt6.76□□□□□ -1.33
CDC39P25655 THI73YLR004C 1572 nt6.76□□□□□ -1.33
CDC39P25655 RPS6AYPL090C 711 nt6.76□□□□□ -1.33
CDC39P25655 RPS6BYBR181C 711 nt6.76□□□□□ -1.33
CDC39P25655 ESBP6YNL125C 2022 nt6.75□□□□□ -1.33
CDC39P25655 RPR1RPR1 369 nt6.75□□□□□ -1.33
CDC39P25655 TPO1YLL028W 1761 nt6.74□□□□□ -1.33
CDC39P25655 PUP2YGR253C 783 nt6.74□□□□□ -1.33
CDC39P25655 RHO1YPR165W 630 nt6.74□□□□□ -1.33
CDC39P25655 ALD5YER073W 1563 nt6.74□□□□□ -1.33
CDC39P25655 URA1YKL216W 945 nt6.74□□□□□ -1.33
CDC39P25655 HBS1YKR084C 1836 nt6.73□□□□□ -1.33
CDC39P25655 MFT1YML062C 1179 nt6.73□□□□□ -1.33
CDC39P25655 COS10YNR075W 1125 nt6.73□□□□□ -1.33
CDC39P25655 snR4snR4 186 nt6.73□□□□□ -1.33
CDC39P25655 ORT1YOR130C 879 nt6.72□□□□□ -1.33
CDC39P25655 ARG7YMR062C 1326 nt6.71□□□□□ -1.33
CDC39P25655 GLY1YEL046C 1164 nt6.71□□□□□ -1.33
CDC39P25655 HXK1YFR053C 1458 nt6.71□□□□□ -1.34
CDC39P25655 TIF3YPR163C 1311 nt6.7□□□□□ -1.34
CDC39P25655 LPD1YFL018C 1500 nt6.7□□□□□ -1.34
CDC39P25655 CRN1YLR429W 1956 nt6.7□□□□□ -1.34
CDC39P25655 TIM50YPL063W 1431 nt6.7□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 58.7 ms