Protein–RNA interactions for Protein: P22138

RPA135, DNA-directed RNA polymerase I subunit RPA135, yeastyeast

Known RBP Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA135P22138 tE(CUC)ItE(CUC)I 72 nt7.72□□□□□ -1.17
RPA135P22138 PUS5YLR165C 765 nt7.72□□□□□ -1.17
RPA135P22138 CRC1YOR100C 984 nt7.72□□□□□ -1.17
RPA135P22138 YFL052WYFL052W 1398 nt7.71□□□□□ -1.17
RPA135P22138 CCT5YJR064W 1689 nt7.71□□□□□ -1.18
RPA135P22138 HMS2YJR147W 1077 nt7.71□□□□□ -1.18
RPA135P22138 MKK1YOR231W 1527 nt7.71□□□□□ -1.18
RPA135P22138 TVP23YDR084C 600 nt7.7□□□□□ -1.18
RPA135P22138 YJL195CYJL195C 702 nt7.7□□□□□ -1.18
RPA135P22138 MIM1YOL026C 342 nt7.7□□□□□ -1.18
RPA135P22138 YDR401WYDR401W 564 nt7.69□□□□□ -1.18
RPA135P22138 INP54YOL065C 1155 nt7.69□□□□□ -1.18
RPA135P22138 IME2YJL106W 1938 nt7.69□□□□□ -1.18
RPA135P22138 tD(GUC)BtD(GUC)B 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)DtD(GUC)D 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)G1tD(GUC)G1 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)G2tD(GUC)G2 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)I1tD(GUC)I1 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)I2tD(GUC)I2 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)J1tD(GUC)J1 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)J2tD(GUC)J2 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)J3tD(GUC)J3 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)J4tD(GUC)J4 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)KtD(GUC)K 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)L1tD(GUC)L1 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)L2tD(GUC)L2 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)MtD(GUC)M 72 nt7.68□□□□□ -1.18
RPA135P22138 tD(GUC)OtD(GUC)O 72 nt7.68□□□□□ -1.18
RPA135P22138 SPS100YHR139C 981 nt7.68□□□□□ -1.18
RPA135P22138 YTH1YPR107C 627 nt7.68□□□□□ -1.18
RPA135P22138 YLL058WYLL058W 1728 nt7.67□□□□□ -1.18
RPA135P22138 SWT21YNL187W 1074 nt7.67□□□□□ -1.18
RPA135P22138 CTI6YPL181W 1521 nt7.67□□□□□ -1.18
RPA135P22138 HST2YPL015C 1074 nt7.66□□□□□ -1.18
RPA135P22138 FTH1YBR207W 1398 nt7.66□□□□□ -1.18
RPA135P22138 AIM34YMR003W 597 nt7.65□□□□□ -1.18
RPA135P22138 snR31snR31 225 nt7.65□□□□□ -1.18
RPA135P22138 TRP2YER090W 1524 nt7.64□□□□□ -1.19
RPA135P22138 GPM1YKL152C 744 nt7.64□□□□□ -1.19
RPA135P22138 TOP3YLR234W 1971 nt7.64□□□□□ -1.19
RPA135P22138 PRB1YEL060C 1908 nt7.64□□□□□ -1.19
RPA135P22138 MAS2YHR024C 1449 nt7.63□□□□□ -1.19
RPA135P22138 KGD2YDR148C 1392 nt7.63□□□□□ -1.19
RPA135P22138 DFR1YOR236W 636 nt7.63□□□□□ -1.19
RPA135P22138 KNS1YLL019C 2214 nt7.62□□□□□ -1.19
RPA135P22138 POP2YNR052C 1302 nt7.62□□□□□ -1.19
RPA135P22138 YEL009C-AYEL009C-A 408 nt7.62□□□□□ -1.19
RPA135P22138 YKL053WYKL053W 375 nt7.62□□□□□ -1.19
RPA135P22138 GSF2YML048W 1212 nt7.62□□□□□ -1.19
RPA135P22138 ABZ2YMR289W 1125 nt7.62□□□□□ -1.19
RPA135P22138 YBL095WYBL095W 813 nt7.62□□□□□ -1.19
RPA135P22138 HXT13YEL069C 1695 nt7.62□□□□□ -1.19
RPA135P22138 HBS1YKR084C 1836 nt7.61□□□□□ -1.19
RPA135P22138 SGE1YPR198W 1632 nt7.6□□□□□ -1.19
RPA135P22138 THI3YDL080C 1830 nt7.6□□□□□ -1.19
RPA135P22138 FUN14YAL008W 597 nt7.6□□□□□ -1.19
RPA135P22138 HXT11YOL156W 1704 nt7.6□□□□□ -1.19
RPA135P22138 AAT1YKL106W 1356 nt7.59□□□□□ -1.19
RPA135P22138 ENO2YHR174W 1314 nt7.59□□□□□ -1.19
RPA135P22138 AMF1YOR378W 1548 nt7.59□□□□□ -1.19
RPA135P22138 MHF1YOL086W-A 273 nt7.59□□□□□ -1.19
RPA135P22138 CDC13YDL220C 2775 nt7.59□□□□□ -1.2
RPA135P22138 PPZ2YDR436W 2133 nt7.58□□□□□ -1.2
RPA135P22138 YEL008WYEL008W 381 nt7.58□□□□□ -1.2
RPA135P22138 ATO2YNR002C 849 nt7.58□□□□□ -1.2
RPA135P22138 YMC2YBR104W 990 nt7.58□□□□□ -1.2
RPA135P22138 TGL5YOR081C 2250 nt7.58□□□□□ -1.2
RPA135P22138 MSN2YMR037C 2115 nt7.57□□□□□ -1.2
RPA135P22138 EMC3YKL207W 762 nt7.57□□□□□ -1.2
RPA135P22138 RIX7YLL034C 2514 nt7.57□□□□□ -1.2
RPA135P22138 GGA2YHR108W 1758 nt7.56□□□□□ -1.2
RPA135P22138 SAN1YDR143C 1833 nt7.55□□□□□ -1.2
RPA135P22138 SRM1YGL097W 1449 nt7.55□□□□□ -1.2
RPA135P22138 CHA1YCL064C 1083 nt7.55□□□□□ -1.2
RPA135P22138 TAF13YML098W 504 nt7.55□□□□□ -1.2
RPA135P22138 YMR316C-BYMR316C-B 309 nt7.55□□□□□ -1.2
RPA135P22138 YNL040WYNL040W 1371 nt7.55□□□□□ -1.2
RPA135P22138 POT1YIL160C 1254 nt7.54□□□□□ -1.2
RPA135P22138 REG2YBR050C 1017 nt7.54□□□□□ -1.2
RPA135P22138 TPC1YGR096W 945 nt7.53□□□□□ -1.2
RPA135P22138 SBP1YHL034C 885 nt7.53□□□□□ -1.2
RPA135P22138 ORT1YOR130C 879 nt7.53□□□□□ -1.2
RPA135P22138 TFB4YPR056W 1017 nt7.53□□□□□ -1.2
RPA135P22138 HXT15YDL245C 1704 nt7.52□□□□□ -1.2
RPA135P22138 HXT16YJR158W 1704 nt7.52□□□□□ -1.2
RPA135P22138 ITR1YDR497C 1755 nt7.52□□□□□ -1.21
RPA135P22138 ESS1YJR017C 513 nt7.52□□□□□ -1.21
RPA135P22138 DEF1YKL054C 2217 nt7.51□□□□□ -1.21
RPA135P22138 VBA3YCL069W 1377 nt7.51□□□□□ -1.21
RPA135P22138 YDL023CYDL023C 321 nt7.51□□□□□ -1.21
RPA135P22138 EMW1YNL313C 2715 nt7.5□□□□□ -1.21
RPA135P22138 ORM1YGR038W 669 nt7.5□□□□□ -1.21
RPA135P22138 MRS4YKR052C 915 nt7.5□□□□□ -1.21
RPA135P22138 OST3YOR085W 1053 nt7.5□□□□□ -1.21
RPA135P22138 IRS4YKR019C 1848 nt7.5□□□□□ -1.21
RPA135P22138 MSS1YMR023C 1581 nt7.5□□□□□ -1.21
RPA135P22138 YLR072WYLR072W 2082 nt7.49□□□□□ -1.21
RPA135P22138 snR4snR4 186 nt7.49□□□□□ -1.21
RPA135P22138 LEU2YCL018W 1095 nt7.49□□□□□ -1.21
RPA135P22138 SRP101YDR292C 1866 nt7.48□□□□□ -1.21
Retrieved 100 of 7,029 protein–RNA pairs in 28.5 ms