Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctla2aP12399 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctla2aP12399 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ctla2aP12399 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ctla2aP12399 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctla2aP12399 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctla2aP12399 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctla2aP12399 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ctla2aP12399 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctla2aP12399 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctla2aP12399 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctla2aP12399 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.16■□□□□ 0.98
Ctla2aP12399 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ctla2aP12399 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ctla2aP12399 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ctla2aP12399 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ctla2aP12399 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ctla2aP12399 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Ctla2aP12399 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ctla2aP12399 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ctla2aP12399 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ctla2aP12399 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ctla2aP12399 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ctla2aP12399 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ctla2aP12399 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ctla2aP12399 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Ctla2aP12399 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ctla2aP12399 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Ctla2aP12399 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ctla2aP12399 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Ctla2aP12399 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ctla2aP12399 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ctla2aP12399 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ctla2aP12399 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ctla2aP12399 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ctla2aP12399 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ctla2aP12399 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ctla2aP12399 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ctla2aP12399 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Ctla2aP12399 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ctla2aP12399 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ctla2aP12399 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ctla2aP12399 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Ctla2aP12399 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.96
Ctla2aP12399 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ctla2aP12399 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ctla2aP12399 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ctla2aP12399 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ctla2aP12399 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ctla2aP12399 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.06■□□□□ 0.96
Ctla2aP12399 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ctla2aP12399 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Ctla2aP12399 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ctla2aP12399 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ctla2aP12399 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ctla2aP12399 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ctla2aP12399 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ctla2aP12399 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ctla2aP12399 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ctla2aP12399 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.04■□□□□ 0.96
Ctla2aP12399 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ctla2aP12399 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ctla2aP12399 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ctla2aP12399 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ctla2aP12399 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ctla2aP12399 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ctla2aP12399 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.03■□□□□ 0.96
Ctla2aP12399 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ctla2aP12399 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ctla2aP12399 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ctla2aP12399 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
Ctla2aP12399 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ctla2aP12399 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ctla2aP12399 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ctla2aP12399 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ctla2aP12399 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ctla2aP12399 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ctla2aP12399 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ctla2aP12399 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctla2aP12399 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ctla2aP12399 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctla2aP12399 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctla2aP12399 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ctla2aP12399 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctla2aP12399 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctla2aP12399 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctla2aP12399 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ctla2aP12399 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctla2aP12399 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ctla2aP12399 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ctla2aP12399 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Ctla2aP12399 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ctla2aP12399 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ctla2aP12399 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctla2aP12399 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.99■□□□□ 0.95
Ctla2aP12399 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ctla2aP12399 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ctla2aP12399 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.98■□□□□ 0.95
Ctla2aP12399 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ctla2aP12399 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms