Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
IghmP01872 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
IghmP01872 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
IghmP01872 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
IghmP01872 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
IghmP01872 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
IghmP01872 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
IghmP01872 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
IghmP01872 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
IghmP01872 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
IghmP01872 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
IghmP01872 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
IghmP01872 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.19■■□□□ 1.14
IghmP01872 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
IghmP01872 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
IghmP01872 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
IghmP01872 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
IghmP01872 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
IghmP01872 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
IghmP01872 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
IghmP01872 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
IghmP01872 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
IghmP01872 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
IghmP01872 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
IghmP01872 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
IghmP01872 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
IghmP01872 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
IghmP01872 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
IghmP01872 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
IghmP01872 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.13■■□□□ 1.13
IghmP01872 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
IghmP01872 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
IghmP01872 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
IghmP01872 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.12■■□□□ 1.13
IghmP01872 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
IghmP01872 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
IghmP01872 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.11■■□□□ 1.13
IghmP01872 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
IghmP01872 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
IghmP01872 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
IghmP01872 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
IghmP01872 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
IghmP01872 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.09■■□□□ 1.13
IghmP01872 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.09■■□□□ 1.13
IghmP01872 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
IghmP01872 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.09■■□□□ 1.13
IghmP01872 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
IghmP01872 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
IghmP01872 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
IghmP01872 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
IghmP01872 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
IghmP01872 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
IghmP01872 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
IghmP01872 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
IghmP01872 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
IghmP01872 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
IghmP01872 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
IghmP01872 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
IghmP01872 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
IghmP01872 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
IghmP01872 Particl-201ENSMUST00000205370 1560 ntBASIC22.06■■□□□ 1.12
IghmP01872 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
IghmP01872 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
IghmP01872 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
IghmP01872 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
IghmP01872 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
IghmP01872 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
IghmP01872 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
IghmP01872 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
IghmP01872 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
IghmP01872 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
IghmP01872 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
IghmP01872 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
IghmP01872 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
IghmP01872 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
IghmP01872 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
IghmP01872 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
IghmP01872 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
IghmP01872 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
IghmP01872 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22■■□□□ 1.11
IghmP01872 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IghmP01872 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
IghmP01872 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
IghmP01872 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IghmP01872 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
IghmP01872 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IghmP01872 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IghmP01872 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
IghmP01872 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IghmP01872 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IghmP01872 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IghmP01872 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
IghmP01872 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
IghmP01872 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.96■■□□□ 1.11
IghmP01872 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IghmP01872 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IghmP01872 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.94■■□□□ 1.1
IghmP01872 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
IghmP01872 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
IghmP01872 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 208.3 ms