Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-47A0A0A6YY41 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.41■□□□□ 0.7
Ighv1-47A0A0A6YY41 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-47A0A0A6YY41 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-47A0A0A6YY41 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ighv1-47A0A0A6YY41 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv1-47A0A0A6YY41 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ighv1-47A0A0A6YY41 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Ighv1-47A0A0A6YY41 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ighv1-47A0A0A6YY41 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ighv1-47A0A0A6YY41 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.39■□□□□ 0.69
Ighv1-47A0A0A6YY41 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ighv1-47A0A0A6YY41 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.38■□□□□ 0.69
Ighv1-47A0A0A6YY41 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv1-47A0A0A6YY41 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv1-47A0A0A6YY41 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv1-47A0A0A6YY41 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv1-47A0A0A6YY41 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ighv1-47A0A0A6YY41 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-47A0A0A6YY41 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ighv1-47A0A0A6YY41 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-47A0A0A6YY41 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ighv1-47A0A0A6YY41 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-47A0A0A6YY41 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-47A0A0A6YY41 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ighv1-47A0A0A6YY41 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-47A0A0A6YY41 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-47A0A0A6YY41 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-47A0A0A6YY41 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-47A0A0A6YY41 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-47A0A0A6YY41 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ighv1-47A0A0A6YY41 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.34■□□□□ 0.69
Ighv1-47A0A0A6YY41 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ighv1-47A0A0A6YY41 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv1-47A0A0A6YY41 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv1-47A0A0A6YY41 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv1-47A0A0A6YY41 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-47A0A0A6YY41 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-47A0A0A6YY41 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ighv1-47A0A0A6YY41 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.32■□□□□ 0.68
Ighv1-47A0A0A6YY41 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-47A0A0A6YY41 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ighv1-47A0A0A6YY41 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Ighv1-47A0A0A6YY41 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-47A0A0A6YY41 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-47A0A0A6YY41 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-47A0A0A6YY41 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-47A0A0A6YY41 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-47A0A0A6YY41 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-47A0A0A6YY41 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ighv1-47A0A0A6YY41 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-47A0A0A6YY41 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-47A0A0A6YY41 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-47A0A0A6YY41 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-47A0A0A6YY41 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-47A0A0A6YY41 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-47A0A0A6YY41 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-47A0A0A6YY41 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-47A0A0A6YY41 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ighv1-47A0A0A6YY41 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-47A0A0A6YY41 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ighv1-47A0A0A6YY41 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.25■□□□□ 0.67
Ighv1-47A0A0A6YY41 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-47A0A0A6YY41 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-47A0A0A6YY41 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-47A0A0A6YY41 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ighv1-47A0A0A6YY41 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-47A0A0A6YY41 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-47A0A0A6YY41 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-47A0A0A6YY41 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-47A0A0A6YY41 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-47A0A0A6YY41 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ighv1-47A0A0A6YY41 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-47A0A0A6YY41 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-47A0A0A6YY41 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ighv1-47A0A0A6YY41 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-47A0A0A6YY41 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ighv1-47A0A0A6YY41 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ighv1-47A0A0A6YY41 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-47A0A0A6YY41 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-47A0A0A6YY41 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-47A0A0A6YY41 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-47A0A0A6YY41 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-47A0A0A6YY41 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-47A0A0A6YY41 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-47A0A0A6YY41 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.2■□□□□ 0.66
Ighv1-47A0A0A6YY41 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ighv1-47A0A0A6YY41 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.19■□□□□ 0.66
Ighv1-47A0A0A6YY41 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-47A0A0A6YY41 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-47A0A0A6YY41 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-47A0A0A6YY41 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-47A0A0A6YY41 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.18■□□□□ 0.66
Ighv1-47A0A0A6YY41 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ighv1-47A0A0A6YY41 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ighv1-47A0A0A6YY41 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-47A0A0A6YY41 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Ighv1-47A0A0A6YY41 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-47A0A0A6YY41 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-47A0A0A6YY41 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms