Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6n-6A0A075B6B2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trav6n-6A0A075B6B2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6n-6A0A075B6B2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6n-6A0A075B6B2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6n-6A0A075B6B2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6n-6A0A075B6B2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6n-6A0A075B6B2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6n-6A0A075B6B2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Trav6n-6A0A075B6B2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6n-6A0A075B6B2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.33■□□□□ 0.36
Trav6n-6A0A075B6B2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6n-6A0A075B6B2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trav6n-6A0A075B6B2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6n-6A0A075B6B2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.32■□□□□ 0.36
Trav6n-6A0A075B6B2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6n-6A0A075B6B2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trav6n-6A0A075B6B2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6n-6A0A075B6B2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6n-6A0A075B6B2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6n-6A0A075B6B2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6n-6A0A075B6B2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6n-6A0A075B6B2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6n-6A0A075B6B2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6n-6A0A075B6B2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6n-6A0A075B6B2 Gm45855-201ENSMUST00000212546 880 ntBASIC17.31■□□□□ 0.36
Trav6n-6A0A075B6B2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-6A0A075B6B2 Gm9397-201ENSMUST00000200125 605 ntBASIC17.3■□□□□ 0.36
Trav6n-6A0A075B6B2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-6A0A075B6B2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-6A0A075B6B2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-6A0A075B6B2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6n-6A0A075B6B2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-6A0A075B6B2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-6A0A075B6B2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-6A0A075B6B2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-6A0A075B6B2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6n-6A0A075B6B2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav6n-6A0A075B6B2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-6A0A075B6B2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-6A0A075B6B2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-6A0A075B6B2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-6A0A075B6B2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6n-6A0A075B6B2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav6n-6A0A075B6B2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trav6n-6A0A075B6B2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav6n-6A0A075B6B2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6n-6A0A075B6B2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.27■□□□□ 0.35
Trav6n-6A0A075B6B2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-6A0A075B6B2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-6A0A075B6B2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-6A0A075B6B2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Trav6n-6A0A075B6B2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav6n-6A0A075B6B2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-6A0A075B6B2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-6A0A075B6B2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6n-6A0A075B6B2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-6A0A075B6B2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-6A0A075B6B2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-6A0A075B6B2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-6A0A075B6B2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav6n-6A0A075B6B2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trav6n-6A0A075B6B2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6n-6A0A075B6B2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6n-6A0A075B6B2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6n-6A0A075B6B2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6n-6A0A075B6B2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Trav6n-6A0A075B6B2 Gm24970-201ENSMUST00000175582 82 ntBASIC17.23■□□□□ 0.35
Trav6n-6A0A075B6B2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav6n-6A0A075B6B2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.22■□□□□ 0.35
Trav6n-6A0A075B6B2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.22■□□□□ 0.35
Trav6n-6A0A075B6B2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav6n-6A0A075B6B2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trav6n-6A0A075B6B2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav6n-6A0A075B6B2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.21■□□□□ 0.35
Trav6n-6A0A075B6B2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6n-6A0A075B6B2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6n-6A0A075B6B2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.21■□□□□ 0.35
Trav6n-6A0A075B6B2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Trav6n-6A0A075B6B2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6n-6A0A075B6B2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6n-6A0A075B6B2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav6n-6A0A075B6B2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trav6n-6A0A075B6B2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-6A0A075B6B2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-6A0A075B6B2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-6A0A075B6B2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-6A0A075B6B2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-6A0A075B6B2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav6n-6A0A075B6B2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-6A0A075B6B2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-6A0A075B6B2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.19■□□□□ 0.34
Trav6n-6A0A075B6B2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-6A0A075B6B2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-6A0A075B6B2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-6A0A075B6B2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav6n-6A0A075B6B2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6n-6A0A075B6B2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav6n-6A0A075B6B2 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.18■□□□□ 0.34
Trav6n-6A0A075B6B2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms