Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav14n-3A0A075B645 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav14n-3A0A075B645 Peli2-204ENSMUST00000226513 1320 ntBASIC17.74■□□□□ 0.43
Trav14n-3A0A075B645 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav14n-3A0A075B645 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav14n-3A0A075B645 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav14n-3A0A075B645 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav14n-3A0A075B645 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav14n-3A0A075B645 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav14n-3A0A075B645 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav14n-3A0A075B645 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trav14n-3A0A075B645 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav14n-3A0A075B645 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav14n-3A0A075B645 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav14n-3A0A075B645 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav14n-3A0A075B645 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav14n-3A0A075B645 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav14n-3A0A075B645 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav14n-3A0A075B645 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav14n-3A0A075B645 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav14n-3A0A075B645 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Trav14n-3A0A075B645 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav14n-3A0A075B645 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav14n-3A0A075B645 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav14n-3A0A075B645 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav14n-3A0A075B645 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav14n-3A0A075B645 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav14n-3A0A075B645 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav14n-3A0A075B645 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav14n-3A0A075B645 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trav14n-3A0A075B645 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav14n-3A0A075B645 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav14n-3A0A075B645 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav14n-3A0A075B645 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav14n-3A0A075B645 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav14n-3A0A075B645 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav14n-3A0A075B645 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav14n-3A0A075B645 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav14n-3A0A075B645 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trav14n-3A0A075B645 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav14n-3A0A075B645 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav14n-3A0A075B645 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav14n-3A0A075B645 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav14n-3A0A075B645 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Trav14n-3A0A075B645 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Trav14n-3A0A075B645 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav14n-3A0A075B645 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Trav14n-3A0A075B645 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav14n-3A0A075B645 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav14n-3A0A075B645 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav14n-3A0A075B645 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav14n-3A0A075B645 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav14n-3A0A075B645 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav14n-3A0A075B645 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav14n-3A0A075B645 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav14n-3A0A075B645 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav14n-3A0A075B645 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav14n-3A0A075B645 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav14n-3A0A075B645 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav14n-3A0A075B645 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav14n-3A0A075B645 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav14n-3A0A075B645 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav14n-3A0A075B645 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav14n-3A0A075B645 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Trav14n-3A0A075B645 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav14n-3A0A075B645 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Trav14n-3A0A075B645 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav14n-3A0A075B645 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav14n-3A0A075B645 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav14n-3A0A075B645 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav14n-3A0A075B645 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav14n-3A0A075B645 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav14n-3A0A075B645 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav14n-3A0A075B645 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav14n-3A0A075B645 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav14n-3A0A075B645 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav14n-3A0A075B645 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav14n-3A0A075B645 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.61■□□□□ 0.41
Trav14n-3A0A075B645 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav14n-3A0A075B645 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.61■□□□□ 0.41
Trav14n-3A0A075B645 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav14n-3A0A075B645 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav14n-3A0A075B645 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav14n-3A0A075B645 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav14n-3A0A075B645 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav14n-3A0A075B645 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav14n-3A0A075B645 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav14n-3A0A075B645 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav14n-3A0A075B645 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav14n-3A0A075B645 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav14n-3A0A075B645 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav14n-3A0A075B645 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav14n-3A0A075B645 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav14n-3A0A075B645 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav14n-3A0A075B645 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav14n-3A0A075B645 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trav14n-3A0A075B645 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav14n-3A0A075B645 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav14n-3A0A075B645 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav14n-3A0A075B645 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms