Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
COL1A2P08123 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A2P08123 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
COL1A2P08123 AC096733.2-201ENST00000609937 1394 ntBASIC21.54■■□□□ 1.04
COL1A2P08123 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
COL1A2P08123 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.54■■□□□ 1.04
COL1A2P08123 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
COL1A2P08123 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
COL1A2P08123 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL1A2P08123 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A2P08123 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A2P08123 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A2P08123 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A2P08123 CRYGFP-201ENST00000418459 633 ntBASIC21.53■■□□□ 1.04
COL1A2P08123 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.53■■□□□ 1.04
COL1A2P08123 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
COL1A2P08123 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A2P08123 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A2P08123 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A2P08123 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A2P08123 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.53■■□□□ 1.04
COL1A2P08123 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A2P08123 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL1A2P08123 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL1A2P08123 TSPY14P-201ENST00000303979 915 ntBASIC21.52■■□□□ 1.04
COL1A2P08123 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL1A2P08123 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.52■■□□□ 1.04
COL1A2P08123 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.52■■□□□ 1.04
COL1A2P08123 AC113347.1-201ENST00000413321 391 ntBASIC21.52■■□□□ 1.04
COL1A2P08123 AC008040.2-201ENST00000461049 708 ntBASIC21.52■■□□□ 1.04
COL1A2P08123 AC091390.4-202ENST00000476426 537 ntBASIC21.52■■□□□ 1.04
COL1A2P08123 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.52■■□□□ 1.04
COL1A2P08123 SLC25A1P4-201ENST00000567977 778 ntBASIC21.52■■□□□ 1.04
COL1A2P08123 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.52■■□□□ 1.04
COL1A2P08123 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL1A2P08123 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.52■■□□□ 1.04
COL1A2P08123 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.52■■□□□ 1.04
COL1A2P08123 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL1A2P08123 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A2P08123 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.51■■□□□ 1.03
COL1A2P08123 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A2P08123 AC099778.1-201ENST00000568593 1911 ntBASIC21.51■■□□□ 1.03
COL1A2P08123 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
COL1A2P08123 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
COL1A2P08123 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A2P08123 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A2P08123 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.51■■□□□ 1.03
COL1A2P08123 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.51■■□□□ 1.03
COL1A2P08123 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COL1A2P08123 EGLN1P1-201ENST00000531623 762 ntBASIC21.51■■□□□ 1.03
COL1A2P08123 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A2P08123 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A2P08123 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A2P08123 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL1A2P08123 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A2P08123 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A2P08123 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A2P08123 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.5■■□□□ 1.03
COL1A2P08123 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
COL1A2P08123 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.5■■□□□ 1.03
COL1A2P08123 MIR1224-201ENST00000408193 85 ntBASIC21.5■■□□□ 1.03
COL1A2P08123 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.5■■□□□ 1.03
COL1A2P08123 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.5■■□□□ 1.03
COL1A2P08123 RN7SL850P-201ENST00000579959 291 ntBASIC21.5■■□□□ 1.03
COL1A2P08123 AC092865.7-201ENST00000641832 219 ntBASIC21.5■■□□□ 1.03
COL1A2P08123 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
COL1A2P08123 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
COL1A2P08123 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
COL1A2P08123 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A2P08123 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A2P08123 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
COL1A2P08123 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL1A2P08123 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.5■■□□□ 1.03
COL1A2P08123 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A2P08123 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.49■■□□□ 1.03
COL1A2P08123 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.49■■□□□ 1.03
COL1A2P08123 TMPOP1-202ENST00000424642 1267 ntBASIC21.49■■□□□ 1.03
COL1A2P08123 SLC25A3P1-201ENST00000443844 931 ntBASIC21.49■■□□□ 1.03
COL1A2P08123 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.49■■□□□ 1.03
COL1A2P08123 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.49■■□□□ 1.03
COL1A2P08123 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.49■■□□□ 1.03
COL1A2P08123 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.49■■□□□ 1.03
COL1A2P08123 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.49■■□□□ 1.03
COL1A2P08123 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
COL1A2P08123 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A2P08123 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.49■■□□□ 1.03
COL1A2P08123 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
COL1A2P08123 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.49■■□□□ 1.03
COL1A2P08123 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
COL1A2P08123 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A2P08123 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.49■■□□□ 1.03
COL1A2P08123 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
COL1A2P08123 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A2P08123 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
COL1A2P08123 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A2P08123 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.49■■□□□ 1.03
COL1A2P08123 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A2P08123 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.49■■□□□ 1.03
COL1A2P08123 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL1A2P08123 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms