Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
COL1A2P08123 AC011506.1-201ENST00000474329 610 ntBASIC21.64■■□□□ 1.06
COL1A2P08123 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.64■■□□□ 1.06
COL1A2P08123 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.64■■□□□ 1.06
COL1A2P08123 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.64■■□□□ 1.06
COL1A2P08123 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.64■■□□□ 1.06
COL1A2P08123 AP005242.2-201ENST00000580065 1175 ntBASIC21.64■■□□□ 1.06
COL1A2P08123 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL1A2P08123 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.64■■□□□ 1.06
COL1A2P08123 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COL1A2P08123 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL1A2P08123 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL1A2P08123 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL1A2P08123 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL1A2P08123 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.64■■□□□ 1.05
COL1A2P08123 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL1A2P08123 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL1A2P08123 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
COL1A2P08123 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL1A2P08123 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL1A2P08123 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.63■■□□□ 1.05
COL1A2P08123 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.63■■□□□ 1.05
COL1A2P08123 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.63■■□□□ 1.05
COL1A2P08123 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL1A2P08123 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL1A2P08123 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL1A2P08123 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.63■■□□□ 1.05
COL1A2P08123 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.63■■□□□ 1.05
COL1A2P08123 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.63■■□□□ 1.05
COL1A2P08123 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL1A2P08123 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.63■■□□□ 1.05
COL1A2P08123 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL1A2P08123 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL1A2P08123 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.63■■□□□ 1.05
COL1A2P08123 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL1A2P08123 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
COL1A2P08123 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.62■■□□□ 1.05
COL1A2P08123 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.62■■□□□ 1.05
COL1A2P08123 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.62■■□□□ 1.05
COL1A2P08123 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
COL1A2P08123 NAPSB-206ENST00000562112 1266 ntBASIC21.62■■□□□ 1.05
COL1A2P08123 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.62■■□□□ 1.05
COL1A2P08123 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.62■■□□□ 1.05
COL1A2P08123 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.62■■□□□ 1.05
COL1A2P08123 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.62■■□□□ 1.05
COL1A2P08123 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL1A2P08123 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL1A2P08123 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL1A2P08123 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL1A2P08123 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL1A2P08123 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL1A2P08123 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL1A2P08123 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
COL1A2P08123 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL1A2P08123 RCC2P6-201ENST00000526625 1557 ntBASIC21.62■■□□□ 1.05
COL1A2P08123 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL1A2P08123 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL1A2P08123 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.62■■□□□ 1.05
COL1A2P08123 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.61■■□□□ 1.05
COL1A2P08123 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.61■■□□□ 1.05
COL1A2P08123 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL1A2P08123 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL1A2P08123 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL1A2P08123 AL691432.2-201ENST00000607222 2038 ntBASIC21.61■■□□□ 1.05
COL1A2P08123 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.61■■□□□ 1.05
COL1A2P08123 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COL1A2P08123 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL1A2P08123 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.61■■□□□ 1.05
COL1A2P08123 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL1A2P08123 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL1A2P08123 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
COL1A2P08123 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL1A2P08123 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL1A2P08123 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL1A2P08123 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
COL1A2P08123 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.6■■□□□ 1.05
COL1A2P08123 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL1A2P08123 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
COL1A2P08123 RCN1P1-201ENST00000400413 996 ntBASIC21.6■■□□□ 1.05
COL1A2P08123 AC004951.3-201ENST00000418645 1148 ntBASIC21.6■■□□□ 1.05
COL1A2P08123 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.6■■□□□ 1.05
COL1A2P08123 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.6■■□□□ 1.05
COL1A2P08123 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.6■■□□□ 1.05
COL1A2P08123 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.6■■□□□ 1.05
COL1A2P08123 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.6■■□□□ 1.05
COL1A2P08123 AC010947.1-201ENST00000623454 693 ntBASIC21.6■■□□□ 1.05
COL1A2P08123 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.6■■□□□ 1.05
COL1A2P08123 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL1A2P08123 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL1A2P08123 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A2P08123 CYP2D8P-201ENST00000433633 1490 ntBASIC21.59■■□□□ 1.05
COL1A2P08123 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A2P08123 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
COL1A2P08123 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A2P08123 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A2P08123 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A2P08123 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.59■■□□□ 1.05
COL1A2P08123 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A2P08123 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL1A2P08123 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms