Protein–RNA interactions for Protein: Q07657

SHS1, Seventh homolog of septin 1, yeastyeast

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHS1Q07657 tM(CAU)Q2tM(CAU)Q2 78 nt-0.14□□□□□ -2.43
SHS1Q07657 snR52snR52 92 nt-0.14□□□□□ -2.43
SHS1Q07657 YLR342W-AYLR342W-A 174 nt-0.17□□□□□ -2.44
SHS1Q07657 TFB5YDR079C-A 219 nt-0.18□□□□□ -2.44
SHS1Q07657 YOR329W-AYOR329W-A 210 nt-0.18□□□□□ -2.44
SHS1Q07657 YJL077W-AYJL077W-A 87 nt-0.2□□□□□ -2.44
SHS1Q07657 snR39BsnR39B 96 nt-0.2□□□□□ -2.44
SHS1Q07657 snR48snR48 113 nt-0.2□□□□□ -2.44
SHS1Q07657 YGR146C-AYGR146C-A 162 nt-0.21□□□□□ -2.44
SHS1Q07657 YGR164WYGR164W 336 nt-0.21□□□□□ -2.44
SHS1Q07657 YDR406W-AYDR406W-A 246 nt-0.25□□□□□ -2.45
SHS1Q07657 snR69snR69 101 nt-0.27□□□□□ -2.45
SHS1Q07657 tL(UAA)QtL(UAA)Q 85 nt-0.29□□□□□ -2.46
SHS1Q07657 PMP2YEL017C-A 132 nt-0.32□□□□□ -2.46
SHS1Q07657 SBH2YER019C-A 267 nt-0.32□□□□□ -2.46
SHS1Q07657 YMR046W-AYMR046W-A 129 nt-0.32□□□□□ -2.46
SHS1Q07657 YDL007C-AYDL007C-A 258 nt-0.33□□□□□ -2.46
SHS1Q07657 tQ(UUG)QtQ(UUG)Q 76 nt-0.33□□□□□ -2.46
SHS1Q07657 YHL015W-AYHL015W-A 84 nt-0.34□□□□□ -2.46
SHS1Q07657 YML100W-AYML100W-A 174 nt-0.34□□□□□ -2.46
SHS1Q07657 YJL150WYJL150W 303 nt-0.35□□□□□ -2.47
SHS1Q07657 YOR102WYOR102W 351 nt-0.35□□□□□ -2.47
SHS1Q07657 SPG3YDR504C 384 nt-0.36□□□□□ -2.47
SHS1Q07657 YNL067W-BYNL067W-B 141 nt-0.37□□□□□ -2.47
SHS1Q07657 RDS3YPR094W 324 nt-0.37□□□□□ -2.47
SHS1Q07657 JLP2YMR132C 627 nt-0.39□□□□□ -2.47
SHS1Q07657 YNL205CYNL205C 423 nt-0.4□□□□□ -2.47
SHS1Q07657 YER090C-AYER090C-A 90 nt-0.42□□□□□ -2.48
SHS1Q07657 SEC10YLR166C 2616 nt-0.44□□□□□ -2.48
SHS1Q07657 YNL198CYNL198C 303 nt-0.44□□□□□ -2.48
SHS1Q07657 tD(GUC)QtD(GUC)Q 75 nt-0.45□□□□□ -2.48
SHS1Q07657 tM(CAU)Q1tM(CAU)Q1 76 nt-0.45□□□□□ -2.48
SHS1Q07657 YIL071W-AYIL071W-A 477 nt-0.45□□□□□ -2.48
SHS1Q07657 URB1YKL014C 5295 nt-0.46□□□□□ -2.48
SHS1Q07657 YJL113WYJL113W 4647 nt-0.46□□□□□ -2.48
SHS1Q07657 snR50snR50 90 nt-0.47□□□□□ -2.48
SHS1Q07657 YNL266WYNL266W 420 nt-0.48□□□□□ -2.49
SHS1Q07657 tA(UGC)QtA(UGC)Q 76 nt-0.51□□□□□ -2.49
SHS1Q07657 YBL053WYBL053W 375 nt-0.51□□□□□ -2.49
SHS1Q07657 YBR178WYBR178W 375 nt-0.52□□□□□ -2.49
SHS1Q07657 YLR286W-AYLR286W-A 135 nt-0.53□□□□□ -2.49
SHS1Q07657 PAU9YBL108C-A 129 nt-0.54□□□□□ -2.5
SHS1Q07657 YDL159C-BYDL159C-B 177 nt-0.58□□□□□ -2.5
SHS1Q07657 snR67snR67 82 nt-0.64□□□□□ -2.51
SHS1Q07657 YBR196C-AYBR196C-A 150 nt-0.64□□□□□ -2.51
SHS1Q07657 YLR466C-BYLR466C-B 117 nt-0.66□□□□□ -2.52
SHS1Q07657 SOM1YEL059C-A 225 nt-0.67□□□□□ -2.52
SHS1Q07657 YGR151CYGR151C 336 nt-0.7□□□□□ -2.52
SHS1Q07657 YLR299C-AYLR299C-A 93 nt-0.7□□□□□ -2.52
SHS1Q07657 YCR095W-AYCR095W-A 159 nt-0.71□□□□□ -2.52
SHS1Q07657 YHL009W-BYHL009W-B 5409 nt-0.72□□□□□ -2.52
SHS1Q07657 tT(UGU)G1tT(UGU)G1 72 nt-0.73□□□□□ -2.53
SHS1Q07657 tT(UGU)G2tT(UGU)G2 72 nt-0.73□□□□□ -2.53
SHS1Q07657 tT(UGU)PtT(UGU)P 72 nt-0.73□□□□□ -2.53
SHS1Q07657 SKI7YOR076C 2244 nt-0.76□□□□□ -2.53
SHS1Q07657 YNL338WYNL338W 159 nt-0.8□□□□□ -2.54
SHS1Q07657 snR161snR161 161 nt-0.82□□□□□ -2.54
SHS1Q07657 YNL337WYNL337W 255 nt-0.84□□□□□ -2.54
SHS1Q07657 snR33snR33 183 nt-0.84□□□□□ -2.54
SHS1Q07657 YML054C-AYML054C-A 159 nt-0.88□□□□□ -2.55
SHS1Q07657 Q0032Q0032 291 nt-0.92□□□□□ -2.56
SHS1Q07657 YNR077CYNR077C 255 nt-0.92□□□□□ -2.56
SHS1Q07657 YCL001W-BYCL001W-B 255 nt-0.92□□□□□ -2.56
SHS1Q07657 YHR180C-BYHR180C-B 105 nt-0.96□□□□□ -2.56
SHS1Q07657 YBR223W-AYBR223W-A 120 nt-0.97□□□□□ -2.56
SHS1Q07657 YGL007C-AYGL007C-A 87 nt-0.98□□□□□ -2.57
SHS1Q07657 YOL083C-AYOL083C-A 141 nt-1.09□□□□□ -2.58
SHS1Q07657 YBL071C-BYBL071C-B 99 nt-1.11□□□□□ -2.59
SHS1Q07657 tP(UGG)QtP(UGG)Q 72 nt-1.13□□□□□ -2.59
SHS1Q07657 YAL037C-AYAL037C-A 93 nt-1.15□□□□□ -2.59
SHS1Q07657 YOR376W-AYOR376W-A 156 nt-1.18□□□□□ -2.6
SHS1Q07657 YBR109W-AYBR109W-A 225 nt-1.18□□□□□ -2.6
SHS1Q07657 YOL164W-AYOL164W-A 183 nt-1.19□□□□□ -2.6
SHS1Q07657 YBR296C-AYBR296C-A 120 nt-1.2□□□□□ -2.6
SHS1Q07657 RPL41AYDL184C 78 nt-1.21□□□□□ -2.6
SHS1Q07657 YOR225WYOR225W 330 nt-1.23□□□□□ -2.61
SHS1Q07657 snR81snR81 201 nt-1.24□□□□□ -2.61
SHS1Q07657 YKL106C-AYKL106C-A 120 nt-1.27□□□□□ -2.61
SHS1Q07657 YLR294CYLR294C 330 nt-1.27□□□□□ -2.61
SHS1Q07657 snR77snR77 88 nt-1.29□□□□□ -2.62
SHS1Q07657 snR38snR38 95 nt-1.29□□□□□ -2.62
SHS1Q07657 YGR240C-AYGR240C-A 201 nt-1.31□□□□□ -2.62
SHS1Q07657 CDC65tQ(CUG)M 72 nt-1.32□□□□□ -2.62
SHS1Q07657 YBL100W-CYBL100W-C 120 nt-1.32□□□□□ -2.62
SHS1Q07657 snR47snR47 99 nt-1.32□□□□□ -2.62
SHS1Q07657 YOR316C-AYOR316C-A 210 nt-1.33□□□□□ -2.62
SHS1Q07657 YNL103W-AYNL103W-A 90 nt-1.45□□□□□ -2.64
SHS1Q07657 snR61snR61 90 nt-1.46□□□□□ -2.64
SHS1Q07657 YGL041C-BYGL041C-B 183 nt-1.46□□□□□ -2.64
SHS1Q07657 YNL170WYNL170W 396 nt-1.46□□□□□ -2.64
SHS1Q07657 YMR315W-AYMR315W-A 108 nt-1.49□□□□□ -2.65
SHS1Q07657 tS(GCU)Q1tS(GCU)Q1 86 nt-1.53□□□□□ -2.65
SHS1Q07657 YKL225WYKL225W 348 nt-1.58□□□□□ -2.66
SHS1Q07657 ATP8Q0080 147 nt-1.61□□□□□ -2.67
SHS1Q07657 tY(GUA)QtY(GUA)Q 84 nt-1.61□□□□□ -2.67
SHS1Q07657 YDR034C-AYDR034C-A 177 nt-1.68□□□□□ -2.68
SHS1Q07657 snR62snR62 100 nt-1.7□□□□□ -2.68
SHS1Q07657 YOR309CYOR309C 381 nt-1.82□□□□□ -2.7
SHS1Q07657 YDL114W-AYDL114W-A 114 nt-1.87□□□□□ -2.71
SHS1Q07657 tV(UAC)QtV(UAC)Q 76 nt-1.88□□□□□ -2.71
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms