Protein–RNA interactions for Protein: Q04301

VBA1, Vacuolar basic amino acid transporter 1, yeastyeast

Predictions only

Length 562 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA1Q04301 YJL113WYJL113W 4647 nt-0.57□□□□□ -2.5
VBA1Q04301 URB1YKL014C 5295 nt-0.58□□□□□ -2.5
VBA1Q04301 snR65snR65 100 nt-0.58□□□□□ -2.5
VBA1Q04301 snR69snR69 101 nt-0.6□□□□□ -2.51
VBA1Q04301 tA(UGC)QtA(UGC)Q 76 nt-0.6□□□□□ -2.51
VBA1Q04301 YOL155W-AYOL155W-A 135 nt-0.62□□□□□ -2.51
VBA1Q04301 YOR170WYOR170W 306 nt-0.62□□□□□ -2.51
VBA1Q04301 snR39BsnR39B 96 nt-0.62□□□□□ -2.51
VBA1Q04301 YPL060C-AYPL060C-A 3315 nt-0.66□□□□□ -2.52
VBA1Q04301 YPL152W-AYPL152W-A 99 nt-0.67□□□□□ -2.52
VBA1Q04301 YGR146C-AYGR146C-A 162 nt-0.68□□□□□ -2.52
VBA1Q04301 YOR329W-AYOR329W-A 210 nt-0.68□□□□□ -2.52
VBA1Q04301 RDS3YPR094W 324 nt-0.69□□□□□ -2.52
VBA1Q04301 PMP2YEL017C-A 132 nt-0.7□□□□□ -2.52
VBA1Q04301 snR50snR50 90 nt-0.7□□□□□ -2.52
VBA1Q04301 YER090C-AYER090C-A 90 nt-0.71□□□□□ -2.52
VBA1Q04301 YNL097C-BYNL097C-B 123 nt-0.71□□□□□ -2.52
VBA1Q04301 YNL266WYNL266W 420 nt-0.73□□□□□ -2.53
VBA1Q04301 YOR302WYOR302W 78 nt-0.73□□□□□ -2.53
VBA1Q04301 YDR524W-CYDR524W-C 90 nt-0.76□□□□□ -2.53
VBA1Q04301 YGL188C-AYGL188C-A 141 nt-0.77□□□□□ -2.53
VBA1Q04301 tT(UGU)G1tT(UGU)G1 72 nt-0.77□□□□□ -2.53
VBA1Q04301 tT(UGU)G2tT(UGU)G2 72 nt-0.77□□□□□ -2.53
VBA1Q04301 tT(UGU)PtT(UGU)P 72 nt-0.77□□□□□ -2.53
VBA1Q04301 snR33snR33 183 nt-0.77□□□□□ -2.53
VBA1Q04301 snR52snR52 92 nt-0.78□□□□□ -2.53
VBA1Q04301 JLP2YMR132C 627 nt-0.81□□□□□ -2.54
VBA1Q04301 tD(GUC)QtD(GUC)Q 75 nt-0.82□□□□□ -2.54
VBA1Q04301 YLR342W-AYLR342W-A 174 nt-0.83□□□□□ -2.54
VBA1Q04301 YBR178WYBR178W 375 nt-0.83□□□□□ -2.54
VBA1Q04301 YLR286W-AYLR286W-A 135 nt-0.84□□□□□ -2.54
VBA1Q04301 YNL205CYNL205C 423 nt-0.85□□□□□ -2.55
VBA1Q04301 YOR231C-AYOR231C-A 201 nt-0.85□□□□□ -2.55
VBA1Q04301 snR67snR67 82 nt-0.86□□□□□ -2.55
VBA1Q04301 snR48snR48 113 nt-0.87□□□□□ -2.55
VBA1Q04301 snR80snR80 171 nt-0.89□□□□□ -2.55
VBA1Q04301 YHL009W-BYHL009W-B 5409 nt-0.89□□□□□ -2.55
VBA1Q04301 YDL159C-BYDL159C-B 177 nt-0.9□□□□□ -2.55
VBA1Q04301 tL(UAA)QtL(UAA)Q 85 nt-0.9□□□□□ -2.55
VBA1Q04301 YHL015W-AYHL015W-A 84 nt-0.9□□□□□ -2.55
VBA1Q04301 YOR102WYOR102W 351 nt-0.9□□□□□ -2.55
VBA1Q04301 snR161snR161 161 nt-0.91□□□□□ -2.56
VBA1Q04301 SKI7YOR076C 2244 nt-0.99□□□□□ -2.57
VBA1Q04301 YDR406W-AYDR406W-A 246 nt-1.02□□□□□ -2.57
VBA1Q04301 YLR299C-AYLR299C-A 93 nt-1.02□□□□□ -2.57
VBA1Q04301 YBR196C-AYBR196C-A 150 nt-1.03□□□□□ -2.57
VBA1Q04301 tP(UGG)QtP(UGG)Q 72 nt-1.09□□□□□ -2.58
VBA1Q04301 YBR223W-AYBR223W-A 120 nt-1.09□□□□□ -2.58
VBA1Q04301 YNL198CYNL198C 303 nt-1.12□□□□□ -2.59
VBA1Q04301 YML054C-AYML054C-A 159 nt-1.13□□□□□ -2.59
VBA1Q04301 SOM1YEL059C-A 225 nt-1.2□□□□□ -2.6
VBA1Q04301 YJL150WYJL150W 303 nt-1.2□□□□□ -2.6
VBA1Q04301 YBL053WYBL053W 375 nt-1.2□□□□□ -2.6
VBA1Q04301 YHR180C-BYHR180C-B 105 nt-1.23□□□□□ -2.61
VBA1Q04301 YGR240C-AYGR240C-A 201 nt-1.3□□□□□ -2.62
VBA1Q04301 YCR095W-AYCR095W-A 159 nt-1.32□□□□□ -2.62
VBA1Q04301 Q0142Q0142 177 nt-1.32□□□□□ -2.62
VBA1Q04301 YMR046W-AYMR046W-A 129 nt-1.32□□□□□ -2.62
VBA1Q04301 CDC65tQ(CUG)M 72 nt-1.33□□□□□ -2.62
VBA1Q04301 YNR077CYNR077C 255 nt-1.35□□□□□ -2.63
VBA1Q04301 YOR376W-AYOR376W-A 156 nt-1.35□□□□□ -2.63
VBA1Q04301 snR77snR77 88 nt-1.36□□□□□ -2.63
VBA1Q04301 SPG3YDR504C 384 nt-1.37□□□□□ -2.63
VBA1Q04301 YKL106C-AYKL106C-A 120 nt-1.44□□□□□ -2.64
VBA1Q04301 YMR315W-AYMR315W-A 108 nt-1.44□□□□□ -2.64
VBA1Q04301 snR81snR81 201 nt-1.48□□□□□ -2.65
VBA1Q04301 YGR151CYGR151C 336 nt-1.48□□□□□ -2.65
VBA1Q04301 tY(GUA)QtY(GUA)Q 84 nt-1.48□□□□□ -2.65
VBA1Q04301 RPL41AYDL184C 78 nt-1.5□□□□□ -2.65
VBA1Q04301 YOL083C-AYOL083C-A 141 nt-1.5□□□□□ -2.65
VBA1Q04301 tM(CAU)Q1tM(CAU)Q1 76 nt-1.51□□□□□ -2.65
VBA1Q04301 YOR316C-AYOR316C-A 210 nt-1.51□□□□□ -2.65
VBA1Q04301 YBR296C-AYBR296C-A 120 nt-1.51□□□□□ -2.65
VBA1Q04301 YBR109W-AYBR109W-A 225 nt-1.54□□□□□ -2.66
VBA1Q04301 YCL001W-BYCL001W-B 255 nt-1.56□□□□□ -2.66
VBA1Q04301 YLR466C-BYLR466C-B 117 nt-1.57□□□□□ -2.66
VBA1Q04301 YBL071C-BYBL071C-B 99 nt-1.59□□□□□ -2.66
VBA1Q04301 YNL338WYNL338W 159 nt-1.62□□□□□ -2.67
VBA1Q04301 YOL164W-AYOL164W-A 183 nt-1.63□□□□□ -2.67
VBA1Q04301 snR38snR38 95 nt-1.67□□□□□ -2.68
VBA1Q04301 snR47snR47 99 nt-1.67□□□□□ -2.68
VBA1Q04301 YAL037C-AYAL037C-A 93 nt-1.69□□□□□ -2.68
VBA1Q04301 YBL100W-CYBL100W-C 120 nt-1.69□□□□□ -2.68
VBA1Q04301 YOR309CYOR309C 381 nt-1.79□□□□□ -2.7
VBA1Q04301 YNL337WYNL337W 255 nt-1.81□□□□□ -2.7
VBA1Q04301 tS(GCU)Q1tS(GCU)Q1 86 nt-1.91□□□□□ -2.72
VBA1Q04301 YKL225WYKL225W 348 nt-1.94□□□□□ -2.72
VBA1Q04301 snR6snR6 112 nt-2□□□□□ -2.73
VBA1Q04301 YBR126W-BYBR126W-B 144 nt-2.01□□□□□ -2.73
VBA1Q04301 YGL041C-BYGL041C-B 183 nt-2.02□□□□□ -2.73
VBA1Q04301 Q0032Q0032 291 nt-2.03□□□□□ -2.73
VBA1Q04301 RPL41BYDL133C-A 78 nt-2.03□□□□□ -2.73
VBA1Q04301 YDL114W-AYDL114W-A 114 nt-2.05□□□□□ -2.74
VBA1Q04301 YOR335W-AYOR335W-A 81 nt-2.05□□□□□ -2.74
VBA1Q04301 YNL103W-AYNL103W-A 90 nt-2.09□□□□□ -2.74
VBA1Q04301 YDR034C-AYDR034C-A 177 nt-2.11□□□□□ -2.75
VBA1Q04301 snR61snR61 90 nt-2.13□□□□□ -2.75
VBA1Q04301 snR73snR73 106 nt-2.13□□□□□ -2.75
VBA1Q04301 YGL007C-AYGL007C-A 87 nt-2.13□□□□□ -2.75
VBA1Q04301 tV(UAC)QtV(UAC)Q 76 nt-2.14□□□□□ -2.75
Retrieved 100 of 7,029 protein–RNA pairs in 36.1 ms