Protein–RNA interactions for Protein: Q03390

VPS60, Vacuolar protein-sorting-associated protein 60, yeastyeast

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS60Q03390 YOR302WYOR302W 78 nt-0.48□□□□□ -2.49
VPS60Q03390 YOR231C-AYOR231C-A 201 nt-0.5□□□□□ -2.49
VPS60Q03390 YGL188C-AYGL188C-A 141 nt-0.51□□□□□ -2.49
VPS60Q03390 tQ(UUG)QtQ(UUG)Q 76 nt-0.52□□□□□ -2.49
VPS60Q03390 YIL071W-AYIL071W-A 477 nt-0.52□□□□□ -2.49
VPS60Q03390 YML100W-AYML100W-A 174 nt-0.52□□□□□ -2.49
VPS60Q03390 SEC10YLR166C 2616 nt-0.53□□□□□ -2.49
VPS60Q03390 snR39BsnR39B 96 nt-0.54□□□□□ -2.5
VPS60Q03390 snR69snR69 101 nt-0.55□□□□□ -2.5
VPS60Q03390 YGR146C-AYGR146C-A 162 nt-0.55□□□□□ -2.5
VPS60Q03390 YDL007C-AYDL007C-A 258 nt-0.57□□□□□ -2.5
VPS60Q03390 YOR329W-AYOR329W-A 210 nt-0.58□□□□□ -2.5
VPS60Q03390 URB1YKL014C 5295 nt-0.61□□□□□ -2.51
VPS60Q03390 tA(UGC)QtA(UGC)Q 76 nt-0.62□□□□□ -2.51
VPS60Q03390 PMP2YEL017C-A 132 nt-0.62□□□□□ -2.51
VPS60Q03390 PAU9YBL108C-A 129 nt-0.63□□□□□ -2.51
VPS60Q03390 YNL067W-BYNL067W-B 141 nt-0.64□□□□□ -2.51
VPS60Q03390 RDS3YPR094W 324 nt-0.64□□□□□ -2.51
VPS60Q03390 snR80snR80 171 nt-0.65□□□□□ -2.51
VPS60Q03390 snR52snR52 92 nt-0.65□□□□□ -2.51
VPS60Q03390 YER090C-AYER090C-A 90 nt-0.66□□□□□ -2.52
VPS60Q03390 YLR342W-AYLR342W-A 174 nt-0.67□□□□□ -2.52
VPS60Q03390 snR48snR48 113 nt-0.68□□□□□ -2.52
VPS60Q03390 snR50snR50 90 nt-0.71□□□□□ -2.52
VPS60Q03390 YNL266WYNL266W 420 nt-0.72□□□□□ -2.52
VPS60Q03390 tD(GUC)QtD(GUC)Q 75 nt-0.76□□□□□ -2.53
VPS60Q03390 YNL205CYNL205C 423 nt-0.76□□□□□ -2.53
VPS60Q03390 tL(UAA)QtL(UAA)Q 85 nt-0.77□□□□□ -2.53
VPS60Q03390 JLP2YMR132C 627 nt-0.77□□□□□ -2.53
VPS60Q03390 YJL113WYJL113W 4647 nt-0.79□□□□□ -2.54
VPS60Q03390 YHL015W-AYHL015W-A 84 nt-0.81□□□□□ -2.54
VPS60Q03390 YOR102WYOR102W 351 nt-0.81□□□□□ -2.54
VPS60Q03390 Q0142Q0142 177 nt-0.82□□□□□ -2.54
VPS60Q03390 YLR286W-AYLR286W-A 135 nt-0.82□□□□□ -2.54
VPS60Q03390 YBR178WYBR178W 375 nt-0.83□□□□□ -2.54
VPS60Q03390 YHL009W-BYHL009W-B 5409 nt-0.84□□□□□ -2.54
VPS60Q03390 YDR406W-AYDR406W-A 246 nt-0.85□□□□□ -2.55
VPS60Q03390 snR67snR67 82 nt-0.87□□□□□ -2.55
VPS60Q03390 YDL159C-BYDL159C-B 177 nt-0.87□□□□□ -2.55
VPS60Q03390 tT(UGU)G1tT(UGU)G1 72 nt-0.9□□□□□ -2.55
VPS60Q03390 tT(UGU)G2tT(UGU)G2 72 nt-0.9□□□□□ -2.55
VPS60Q03390 tT(UGU)PtT(UGU)P 72 nt-0.9□□□□□ -2.55
VPS60Q03390 snR33snR33 183 nt-0.9□□□□□ -2.55
VPS60Q03390 YNL198CYNL198C 303 nt-0.98□□□□□ -2.57
VPS60Q03390 SKI7YOR076C 2244 nt-1□□□□□ -2.57
VPS60Q03390 YJL150WYJL150W 303 nt-1.01□□□□□ -2.57
VPS60Q03390 YLR299C-AYLR299C-A 93 nt-1.02□□□□□ -2.57
VPS60Q03390 YBR196C-AYBR196C-A 150 nt-1.02□□□□□ -2.57
VPS60Q03390 snR161snR161 161 nt-1.04□□□□□ -2.58
VPS60Q03390 YMR046W-AYMR046W-A 129 nt-1.06□□□□□ -2.58
VPS60Q03390 YBL053WYBL053W 375 nt-1.11□□□□□ -2.59
VPS60Q03390 SOM1YEL059C-A 225 nt-1.14□□□□□ -2.59
VPS60Q03390 SPG3YDR504C 384 nt-1.17□□□□□ -2.6
VPS60Q03390 YML054C-AYML054C-A 159 nt-1.2□□□□□ -2.6
VPS60Q03390 YCR095W-AYCR095W-A 159 nt-1.21□□□□□ -2.6
VPS60Q03390 YNR077CYNR077C 255 nt-1.21□□□□□ -2.6
VPS60Q03390 tM(CAU)Q1tM(CAU)Q1 76 nt-1.25□□□□□ -2.61
VPS60Q03390 YHR180C-BYHR180C-B 105 nt-1.27□□□□□ -2.61
VPS60Q03390 YBR223W-AYBR223W-A 120 nt-1.28□□□□□ -2.61
VPS60Q03390 tP(UGG)QtP(UGG)Q 72 nt-1.29□□□□□ -2.62
VPS60Q03390 YLR466C-BYLR466C-B 117 nt-1.4□□□□□ -2.63
VPS60Q03390 YGR151CYGR151C 336 nt-1.43□□□□□ -2.64
VPS60Q03390 YOR376W-AYOR376W-A 156 nt-1.43□□□□□ -2.64
VPS60Q03390 YGR240C-AYGR240C-A 201 nt-1.44□□□□□ -2.64
VPS60Q03390 CDC65tQ(CUG)M 72 nt-1.46□□□□□ -2.64
VPS60Q03390 snR77snR77 88 nt-1.49□□□□□ -2.65
VPS60Q03390 YCL001W-BYCL001W-B 255 nt-1.5□□□□□ -2.65
VPS60Q03390 YNL338WYNL338W 159 nt-1.52□□□□□ -2.65
VPS60Q03390 YOL083C-AYOL083C-A 141 nt-1.53□□□□□ -2.65
VPS60Q03390 YKL106C-AYKL106C-A 120 nt-1.54□□□□□ -2.66
VPS60Q03390 YBR296C-AYBR296C-A 120 nt-1.55□□□□□ -2.66
VPS60Q03390 RPL41AYDL184C 78 nt-1.56□□□□□ -2.66
VPS60Q03390 YBR109W-AYBR109W-A 225 nt-1.56□□□□□ -2.66
VPS60Q03390 YBL071C-BYBL071C-B 99 nt-1.57□□□□□ -2.66
VPS60Q03390 YOR316C-AYOR316C-A 210 nt-1.59□□□□□ -2.66
VPS60Q03390 YOL164W-AYOL164W-A 183 nt-1.63□□□□□ -2.67
VPS60Q03390 YAL037C-AYAL037C-A 93 nt-1.65□□□□□ -2.67
VPS60Q03390 YMR315W-AYMR315W-A 108 nt-1.65□□□□□ -2.67
VPS60Q03390 snR81snR81 201 nt-1.69□□□□□ -2.68
VPS60Q03390 snR38snR38 95 nt-1.69□□□□□ -2.68
VPS60Q03390 tY(GUA)QtY(GUA)Q 84 nt-1.72□□□□□ -2.68
VPS60Q03390 YNL337WYNL337W 255 nt-1.72□□□□□ -2.68
VPS60Q03390 snR47snR47 99 nt-1.74□□□□□ -2.69
VPS60Q03390 YBL100W-CYBL100W-C 120 nt-1.75□□□□□ -2.69
VPS60Q03390 Q0032Q0032 291 nt-1.79□□□□□ -2.7
VPS60Q03390 YGL007C-AYGL007C-A 87 nt-1.89□□□□□ -2.71
VPS60Q03390 tS(GCU)Q1tS(GCU)Q1 86 nt-2□□□□□ -2.73
VPS60Q03390 YKL225WYKL225W 348 nt-2.01□□□□□ -2.73
VPS60Q03390 YOR309CYOR309C 381 nt-2.03□□□□□ -2.73
VPS60Q03390 YGL041C-BYGL041C-B 183 nt-2.04□□□□□ -2.74
VPS60Q03390 YNL103W-AYNL103W-A 90 nt-2.08□□□□□ -2.74
VPS60Q03390 snR61snR61 90 nt-2.1□□□□□ -2.75
VPS60Q03390 snR6snR6 112 nt-2.17□□□□□ -2.76
VPS60Q03390 YDR034C-AYDR034C-A 177 nt-2.19□□□□□ -2.76
VPS60Q03390 YLR294CYLR294C 330 nt-2.21□□□□□ -2.76
VPS60Q03390 YDL114W-AYDL114W-A 114 nt-2.22□□□□□ -2.76
VPS60Q03390 tV(UAC)QtV(UAC)Q 76 nt-2.25□□□□□ -2.77
VPS60Q03390 snR62snR62 100 nt-2.26□□□□□ -2.77
VPS60Q03390 YOR225WYOR225W 330 nt-2.27□□□□□ -2.77
VPS60Q03390 RPL41BYDL133C-A 78 nt-2.28□□□□□ -2.77
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms