Protein–RNA interactions for Protein: P53285

VPS62, Vacuolar protein sorting-associated protein 62, yeastyeast

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS62P53285 YSP1YHR155W 3687 nt1.34□□□□□ -2.19
VPS62P53285 GLG1YKR058W 1851 nt1.33□□□□□ -2.2
VPS62P53285 SPC110YDR356W 2835 nt1.32□□□□□ -2.2
VPS62P53285 UTP20YBL004W 7482 nt1.31□□□□□ -2.2
VPS62P53285 HKR1YDR420W 5409 nt1.31□□□□□ -2.2
VPS62P53285 tD(GUC)QtD(GUC)Q 75 nt1.31□□□□□ -2.2
VPS62P53285 DOP1YDR141C 5097 nt1.29□□□□□ -2.2
VPS62P53285 YOL014WYOL014W 375 nt1.29□□□□□ -2.2
VPS62P53285 ULP2YIL031W 3105 nt1.29□□□□□ -2.2
VPS62P53285 ORC3YLL004W 1851 nt1.29□□□□□ -2.2
VPS62P53285 EST1YLR233C 2100 nt1.28□□□□□ -2.2
VPS62P53285 MSN5YDR335W 3675 nt1.26□□□□□ -2.21
VPS62P53285 YLR299C-AYLR299C-A 93 nt1.25□□□□□ -2.21
VPS62P53285 CSE1YGL238W 2883 nt1.24□□□□□ -2.21
VPS62P53285 snR69snR69 101 nt1.23□□□□□ -2.21
VPS62P53285 SPT7YBR081C 3999 nt1.23□□□□□ -2.21
VPS62P53285 MYO1YHR023W 5787 nt1.22□□□□□ -2.21
VPS62P53285 YDL159C-BYDL159C-B 177 nt1.22□□□□□ -2.21
VPS62P53285 YLL006W-AYLL006W-A 177 nt1.22□□□□□ -2.21
VPS62P53285 snR64snR64 101 nt1.17□□□□□ -2.22
VPS62P53285 RDS3YPR094W 324 nt1.17□□□□□ -2.22
VPS62P53285 NIP1YMR309C 2439 nt1.16□□□□□ -2.22
VPS62P53285 snR53snR53 91 nt1.16□□□□□ -2.22
VPS62P53285 BUD3YCL014W 4911 nt1.15□□□□□ -2.22
VPS62P53285 YHR180C-BYHR180C-B 105 nt1.11□□□□□ -2.23
VPS62P53285 BUL2YML111W 2763 nt1.11□□□□□ -2.23
VPS62P53285 YJR029WYJR029W 5268 nt1.1□□□□□ -2.23
VPS62P53285 YPR137C-BYPR137C-B 5268 nt1.1□□□□□ -2.23
VPS62P53285 RKR1YMR247C 4689 nt1.1□□□□□ -2.23
VPS62P53285 YML054C-AYML054C-A 159 nt1.1□□□□□ -2.23
VPS62P53285 tQ(UUG)QtQ(UUG)Q 76 nt1.09□□□□□ -2.23
VPS62P53285 YKL225WYKL225W 348 nt1.09□□□□□ -2.23
VPS62P53285 snR50snR50 90 nt1.09□□□□□ -2.23
VPS62P53285 YJL077W-AYJL077W-A 87 nt1.08□□□□□ -2.24
VPS62P53285 YKL145W-AYKL145W-A 93 nt1.08□□□□□ -2.24
VPS62P53285 YMR160WYMR160W 2451 nt1.08□□□□□ -2.24
VPS62P53285 YOR192C-BYOR192C-B 5313 nt1.07□□□□□ -2.24
VPS62P53285 RPL41AYDL184C 78 nt1.05□□□□□ -2.24
VPS62P53285 YBR109W-AYBR109W-A 225 nt1.05□□□□□ -2.24
VPS62P53285 SCC2YDR180W 4482 nt1.03□□□□□ -2.24
VPS62P53285 NST1YNL091W 3723 nt1.02□□□□□ -2.25
VPS62P53285 YPL060C-AYPL060C-A 3315 nt1.02□□□□□ -2.25
VPS62P53285 VAM6YDL077C 3150 nt1□□□□□ -2.25
VPS62P53285 YBR296C-AYBR296C-A 120 nt0.99□□□□□ -2.25
VPS62P53285 snR38snR38 95 nt0.95□□□□□ -2.26
VPS62P53285 BEM2YER155C 6504 nt0.95□□□□□ -2.26
VPS62P53285 YNL054W-BYNL054W-B 5250 nt0.94□□□□□ -2.26
VPS62P53285 YDR371C-AYDR371C-A 105 nt0.93□□□□□ -2.26
VPS62P53285 YPR117WYPR117W 7470 nt0.92□□□□□ -2.26
VPS62P53285 YER090C-AYER090C-A 90 nt0.91□□□□□ -2.26
VPS62P53285 PET111YMR257C 2403 nt0.9□□□□□ -2.26
VPS62P53285 YDL159W-AYDL159W-A 132 nt0.9□□□□□ -2.27
VPS62P53285 AI1Q0050 2505 nt0.9□□□□□ -2.27
VPS62P53285 SKI7YOR076C 2244 nt0.88□□□□□ -2.27
VPS62P53285 EMT1tM(CAU)D 73 nt0.87□□□□□ -2.27
VPS62P53285 EMT5tM(CAU)J1 73 nt0.87□□□□□ -2.27
VPS62P53285 EMT3tM(CAU)J2 73 nt0.87□□□□□ -2.27
VPS62P53285 EMT4tM(CAU)M 73 nt0.87□□□□□ -2.27
VPS62P53285 EMT2tM(CAU)O2 73 nt0.87□□□□□ -2.27
VPS62P53285 LTE1YAL024C 4308 nt0.82□□□□□ -2.28
VPS62P53285 tT(AGU)BtT(AGU)B 73 nt0.82□□□□□ -2.28
VPS62P53285 tT(AGU)CtT(AGU)C 73 nt0.82□□□□□ -2.28
VPS62P53285 tT(AGU)DtT(AGU)D 73 nt0.82□□□□□ -2.28
VPS62P53285 tT(AGU)HtT(AGU)H 73 nt0.82□□□□□ -2.28
VPS62P53285 tT(AGU)I1tT(AGU)I1 73 nt0.82□□□□□ -2.28
VPS62P53285 tT(AGU)I2tT(AGU)I2 73 nt0.82□□□□□ -2.28
VPS62P53285 tT(AGU)JtT(AGU)J 73 nt0.82□□□□□ -2.28
VPS62P53285 tT(AGU)N1tT(AGU)N1 73 nt0.82□□□□□ -2.28
VPS62P53285 tT(AGU)N2tT(AGU)N2 73 nt0.82□□□□□ -2.28
VPS62P53285 tT(AGU)O1tT(AGU)O1 73 nt0.82□□□□□ -2.28
VPS62P53285 tT(AGU)O2tT(AGU)O2 73 nt0.82□□□□□ -2.28
VPS62P53285 YGR122C-AYGR122C-A 129 nt0.79□□□□□ -2.28
VPS62P53285 snR67snR67 82 nt0.78□□□□□ -2.28
VPS62P53285 YLR149C-AYLR149C-A 87 nt0.78□□□□□ -2.28
VPS62P53285 YBL100W-BYBL100W-B 5313 nt0.73□□□□□ -2.29
VPS62P53285 FMP27YLR454W 7887 nt0.72□□□□□ -2.29
VPS62P53285 YKL096C-BYKL096C-B 150 nt0.69□□□□□ -2.3
VPS62P53285 IQG1YPL242C 4488 nt0.66□□□□□ -2.3
VPS62P53285 MLP1YKR095W 5628 nt0.66□□□□□ -2.3
VPS62P53285 THO2YNL139C 4794 nt0.66□□□□□ -2.3
VPS62P53285 YER078W-AYER078W-A 165 nt0.65□□□□□ -2.31
VPS62P53285 YPR159C-AYPR159C-A 102 nt0.64□□□□□ -2.31
VPS62P53285 UTP10YJL109C 5310 nt0.63□□□□□ -2.31
VPS62P53285 MLP2YIL149C 5040 nt0.62□□□□□ -2.31
VPS62P53285 YMR272W-AYMR272W-A 114 nt0.61□□□□□ -2.31
VPS62P53285 YOR186C-AYOR186C-A 210 nt0.6□□□□□ -2.31
VPS62P53285 YKL106C-AYKL106C-A 120 nt0.56□□□□□ -2.32
VPS62P53285 snR75snR75 89 nt0.53□□□□□ -2.32
VPS62P53285 YML100W-AYML100W-A 174 nt0.49□□□□□ -2.33
VPS62P53285 YDL114W-AYDL114W-A 114 nt0.45□□□□□ -2.34
VPS62P53285 SOV1YMR066W 2697 nt0.41□□□□□ -2.34
VPS62P53285 snR128snR128 126 nt0.37□□□□□ -2.35
VPS62P53285 YOR376W-AYOR376W-A 156 nt0.36□□□□□ -2.35
VPS62P53285 PAU9YBL108C-A 129 nt0.35□□□□□ -2.35
VPS62P53285 tV(UAC)QtV(UAC)Q 76 nt0.33□□□□□ -2.36
VPS62P53285 YOL013W-AYOL013W-A 192 nt0.3□□□□□ -2.36
VPS62P53285 YOR316C-AYOR316C-A 210 nt0.26□□□□□ -2.37
VPS62P53285 ESP1YGR098C 4893 nt0.23□□□□□ -2.37
VPS62P53285 snR77snR77 88 nt0.21□□□□□ -2.38
VPS62P53285 SBH2YER019C-A 267 nt0.2□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 36.9 ms