Protein–RNA interactions for Protein: P53179

RIM8, pH-response regulator protein palF/RIM8, yeastyeast

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM8P53179 RDS3YPR094W 324 nt1.35□□□□□ -2.19
RIM8P53179 SPC110YDR356W 2835 nt1.34□□□□□ -2.19
RIM8P53179 HUG1YML058W-A 207 nt1.34□□□□□ -2.19
RIM8P53179 LAA1YJL207C 6045 nt1.34□□□□□ -2.2
RIM8P53179 YKL096C-BYKL096C-B 150 nt1.33□□□□□ -2.2
RIM8P53179 YNL054W-BYNL054W-B 5250 nt1.32□□□□□ -2.2
RIM8P53179 EST2YLR318W 2655 nt1.32□□□□□ -2.2
RIM8P53179 MSN5YDR335W 3675 nt1.31□□□□□ -2.2
RIM8P53179 tH(GUG)E1tH(GUG)E1 72 nt1.31□□□□□ -2.2
RIM8P53179 tH(GUG)E2tH(GUG)E2 72 nt1.31□□□□□ -2.2
RIM8P53179 tH(GUG)G1tH(GUG)G1 72 nt1.31□□□□□ -2.2
RIM8P53179 tH(GUG)G2tH(GUG)G2 72 nt1.31□□□□□ -2.2
RIM8P53179 tH(GUG)HtH(GUG)H 72 nt1.31□□□□□ -2.2
RIM8P53179 tH(GUG)KtH(GUG)K 72 nt1.31□□□□□ -2.2
RIM8P53179 tH(GUG)MtH(GUG)M 72 nt1.31□□□□□ -2.2
RIM8P53179 YBR296C-AYBR296C-A 120 nt1.31□□□□□ -2.2
RIM8P53179 NIP1YMR309C 2439 nt1.29□□□□□ -2.2
RIM8P53179 PAU12YGR294W 363 nt1.29□□□□□ -2.2
RIM8P53179 SKI7YOR076C 2244 nt1.28□□□□□ -2.2
RIM8P53179 snR75snR75 89 nt1.28□□□□□ -2.2
RIM8P53179 YLL006W-AYLL006W-A 177 nt1.28□□□□□ -2.2
RIM8P53179 YNL284C-BYNL284C-B 5268 nt1.28□□□□□ -2.2
RIM8P53179 HKR1YDR420W 5409 nt1.28□□□□□ -2.2
RIM8P53179 NST1YNL091W 3723 nt1.27□□□□□ -2.21
RIM8P53179 BUL2YML111W 2763 nt1.25□□□□□ -2.21
RIM8P53179 YGR122C-AYGR122C-A 129 nt1.24□□□□□ -2.21
RIM8P53179 SIP4YJL089W 2490 nt1.24□□□□□ -2.21
RIM8P53179 tQ(UUG)QtQ(UUG)Q 76 nt1.22□□□□□ -2.21
RIM8P53179 BEM2YER155C 6504 nt1.22□□□□□ -2.21
RIM8P53179 SPT7YBR081C 3999 nt1.21□□□□□ -2.22
RIM8P53179 YJL077W-AYJL077W-A 87 nt1.2□□□□□ -2.22
RIM8P53179 CLU1YMR012W 3834 nt1.2□□□□□ -2.22
RIM8P53179 YGR130CYGR130C 2451 nt1.18□□□□□ -2.22
RIM8P53179 RKR1YMR247C 4689 nt1.16□□□□□ -2.22
RIM8P53179 YOR192C-BYOR192C-B 5313 nt1.15□□□□□ -2.23
RIM8P53179 YER090C-AYER090C-A 90 nt1.1□□□□□ -2.23
RIM8P53179 PET111YMR257C 2403 nt1.08□□□□□ -2.24
RIM8P53179 YJR029WYJR029W 5268 nt1.07□□□□□ -2.24
RIM8P53179 YPR137C-BYPR137C-B 5268 nt1.07□□□□□ -2.24
RIM8P53179 SCC2YDR180W 4482 nt1.07□□□□□ -2.24
RIM8P53179 IML1YJR138W 4755 nt1.06□□□□□ -2.24
RIM8P53179 DOP1YDR141C 5097 nt1.04□□□□□ -2.24
RIM8P53179 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
RIM8P53179 tV(UAC)BtV(UAC)B 74 nt1.04□□□□□ -2.24
RIM8P53179 tV(UAC)DtV(UAC)D 74 nt1.04□□□□□ -2.24
RIM8P53179 YPR117WYPR117W 7470 nt1□□□□□ -2.25
RIM8P53179 snR67snR67 82 nt0.97□□□□□ -2.25
RIM8P53179 PAU24YBR301W 363 nt0.95□□□□□ -2.26
RIM8P53179 EMT1tM(CAU)D 73 nt0.9□□□□□ -2.27
RIM8P53179 EMT5tM(CAU)J1 73 nt0.9□□□□□ -2.27
RIM8P53179 EMT3tM(CAU)J2 73 nt0.9□□□□□ -2.27
RIM8P53179 EMT4tM(CAU)M 73 nt0.9□□□□□ -2.27
RIM8P53179 EMT2tM(CAU)O2 73 nt0.9□□□□□ -2.27
RIM8P53179 YMR160WYMR160W 2451 nt0.9□□□□□ -2.27
RIM8P53179 MLP2YIL149C 5040 nt0.89□□□□□ -2.27
RIM8P53179 YBL100W-BYBL100W-B 5313 nt0.85□□□□□ -2.27
RIM8P53179 YKL106C-AYKL106C-A 120 nt0.84□□□□□ -2.27
RIM8P53179 LTE1YAL024C 4308 nt0.84□□□□□ -2.28
RIM8P53179 YDL114W-AYDL114W-A 114 nt0.83□□□□□ -2.28
RIM8P53179 THO2YNL139C 4794 nt0.78□□□□□ -2.28
RIM8P53179 tV(UAC)QtV(UAC)Q 76 nt0.78□□□□□ -2.28
RIM8P53179 UTP20YBL004W 7482 nt0.75□□□□□ -2.29
RIM8P53179 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
RIM8P53179 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
RIM8P53179 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
RIM8P53179 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
RIM8P53179 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
RIM8P53179 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
RIM8P53179 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
RIM8P53179 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
RIM8P53179 tT(AGU)N2tT(AGU)N2 73 nt0.73□□□□□ -2.29
RIM8P53179 tT(AGU)O1tT(AGU)O1 73 nt0.73□□□□□ -2.29
RIM8P53179 tT(AGU)O2tT(AGU)O2 73 nt0.73□□□□□ -2.29
RIM8P53179 YOR376W-AYOR376W-A 156 nt0.72□□□□□ -2.29
RIM8P53179 IQG1YPL242C 4488 nt0.66□□□□□ -2.3
RIM8P53179 tF(GAA)BtF(GAA)B 73 nt0.64□□□□□ -2.31
RIM8P53179 tF(GAA)FtF(GAA)F 73 nt0.64□□□□□ -2.31
RIM8P53179 tF(GAA)GtF(GAA)G 73 nt0.64□□□□□ -2.31
RIM8P53179 tF(GAA)H1tF(GAA)H1 73 nt0.64□□□□□ -2.31
RIM8P53179 tF(GAA)H2tF(GAA)H2 73 nt0.64□□□□□ -2.31
RIM8P53179 tF(GAA)MtF(GAA)M 73 nt0.64□□□□□ -2.31
RIM8P53179 tF(GAA)P1tF(GAA)P1 73 nt0.64□□□□□ -2.31
RIM8P53179 tF(GAA)P2tF(GAA)P2 73 nt0.64□□□□□ -2.31
RIM8P53179 YML100W-AYML100W-A 174 nt0.64□□□□□ -2.31
RIM8P53179 YPR159C-AYPR159C-A 102 nt0.64□□□□□ -2.31
RIM8P53179 UTP10YJL109C 5310 nt0.61□□□□□ -2.31
RIM8P53179 YMR272W-AYMR272W-A 114 nt0.6□□□□□ -2.31
RIM8P53179 MLP1YKR095W 5628 nt0.58□□□□□ -2.32
RIM8P53179 YOR186C-AYOR186C-A 210 nt0.58□□□□□ -2.32
RIM8P53179 snR40snR40 97 nt0.57□□□□□ -2.32
RIM8P53179 snR77snR77 88 nt0.55□□□□□ -2.32
RIM8P53179 YOR316C-AYOR316C-A 210 nt0.54□□□□□ -2.32
RIM8P53179 SOV1YMR066W 2697 nt0.53□□□□□ -2.32
RIM8P53179 YKL145W-AYKL145W-A 93 nt0.52□□□□□ -2.33
RIM8P53179 YOL014WYOL014W 375 nt0.52□□□□□ -2.33
RIM8P53179 SBH2YER019C-A 267 nt0.47□□□□□ -2.33
RIM8P53179 ESP1YGR098C 4893 nt0.45□□□□□ -2.34
RIM8P53179 FMP27YLR454W 7887 nt0.44□□□□□ -2.34
RIM8P53179 PAU9YBL108C-A 129 nt0.44□□□□□ -2.34
RIM8P53179 snR128snR128 126 nt0.39□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms