Protein–RNA interactions for Protein: P52286

SKP1, Suppressor of kinetochore protein 1, yeastyeast

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKP1P52286 FYV8YGR196C 2454 nt1.41□□□□□ -2.18
SKP1P52286 YGR130CYGR130C 2451 nt1.4□□□□□ -2.19
SKP1P52286 MYO1YHR023W 5787 nt1.38□□□□□ -2.19
SKP1P52286 YNL284C-BYNL284C-B 5268 nt1.37□□□□□ -2.19
SKP1P52286 snR38snR38 95 nt1.37□□□□□ -2.19
SKP1P52286 FIG2YCR089W 4830 nt1.37□□□□□ -2.19
SKP1P52286 YDL159W-AYDL159W-A 132 nt1.36□□□□□ -2.19
SKP1P52286 SPC110YDR356W 2835 nt1.35□□□□□ -2.19
SKP1P52286 CCH1YGR217W 6120 nt1.35□□□□□ -2.19
SKP1P52286 SKI7YOR076C 2244 nt1.34□□□□□ -2.2
SKP1P52286 CAT8YMR280C 4302 nt1.32□□□□□ -2.2
SKP1P52286 YLR149C-AYLR149C-A 87 nt1.31□□□□□ -2.2
SKP1P52286 AI1Q0050 2505 nt1.3□□□□□ -2.2
SKP1P52286 NST1YNL091W 3723 nt1.3□□□□□ -2.2
SKP1P52286 CLU1YMR012W 3834 nt1.3□□□□□ -2.2
SKP1P52286 YPL060C-AYPL060C-A 3315 nt1.3□□□□□ -2.2
SKP1P52286 BUD3YCL014W 4911 nt1.29□□□□□ -2.2
SKP1P52286 HKR1YDR420W 5409 nt1.29□□□□□ -2.2
SKP1P52286 RKR1YMR247C 4689 nt1.28□□□□□ -2.2
SKP1P52286 NUP192YJL039C 5052 nt1.27□□□□□ -2.21
SKP1P52286 YOR192C-BYOR192C-B 5313 nt1.27□□□□□ -2.21
SKP1P52286 tQ(UUG)E2tQ(UUG)E2 72 nt1.27□□□□□ -2.21
SKP1P52286 YKL096C-BYKL096C-B 150 nt1.26□□□□□ -2.21
SKP1P52286 YGR122C-AYGR122C-A 129 nt1.24□□□□□ -2.21
SKP1P52286 YER090C-AYER090C-A 90 nt1.22□□□□□ -2.21
SKP1P52286 YNL054W-BYNL054W-B 5250 nt1.15□□□□□ -2.23
SKP1P52286 YER078W-AYER078W-A 165 nt1.15□□□□□ -2.23
SKP1P52286 snR75snR75 89 nt1.14□□□□□ -2.23
SKP1P52286 tH(GUG)E1tH(GUG)E1 72 nt1.11□□□□□ -2.23
SKP1P52286 tH(GUG)E2tH(GUG)E2 72 nt1.11□□□□□ -2.23
SKP1P52286 tH(GUG)G1tH(GUG)G1 72 nt1.11□□□□□ -2.23
SKP1P52286 tH(GUG)G2tH(GUG)G2 72 nt1.11□□□□□ -2.23
SKP1P52286 tH(GUG)HtH(GUG)H 72 nt1.11□□□□□ -2.23
SKP1P52286 tH(GUG)KtH(GUG)K 72 nt1.11□□□□□ -2.23
SKP1P52286 tH(GUG)MtH(GUG)M 72 nt1.11□□□□□ -2.23
SKP1P52286 YJR029WYJR029W 5268 nt1.1□□□□□ -2.23
SKP1P52286 YPR137C-BYPR137C-B 5268 nt1.1□□□□□ -2.23
SKP1P52286 PET111YMR257C 2403 nt1.1□□□□□ -2.23
SKP1P52286 SCC2YDR180W 4482 nt1.09□□□□□ -2.24
SKP1P52286 VAM6YDL077C 3150 nt1.09□□□□□ -2.24
SKP1P52286 YPR117WYPR117W 7470 nt1.08□□□□□ -2.24
SKP1P52286 snR67snR67 82 nt1.07□□□□□ -2.24
SKP1P52286 LTE1YAL024C 4308 nt1.06□□□□□ -2.24
SKP1P52286 PAU24YBR301W 363 nt1.03□□□□□ -2.24
SKP1P52286 IML1YJR138W 4755 nt0.99□□□□□ -2.25
SKP1P52286 tV(UAC)BtV(UAC)B 74 nt0.98□□□□□ -2.25
SKP1P52286 tV(UAC)DtV(UAC)D 74 nt0.98□□□□□ -2.25
SKP1P52286 YMR160WYMR160W 2451 nt0.94□□□□□ -2.26
SKP1P52286 EMT1tM(CAU)D 73 nt0.92□□□□□ -2.26
SKP1P52286 EMT5tM(CAU)J1 73 nt0.92□□□□□ -2.26
SKP1P52286 EMT3tM(CAU)J2 73 nt0.92□□□□□ -2.26
SKP1P52286 EMT4tM(CAU)M 73 nt0.92□□□□□ -2.26
SKP1P52286 EMT2tM(CAU)O2 73 nt0.92□□□□□ -2.26
SKP1P52286 DOP1YDR141C 5097 nt0.89□□□□□ -2.27
SKP1P52286 YBL100W-BYBL100W-B 5313 nt0.89□□□□□ -2.27
SKP1P52286 BEM2YER155C 6504 nt0.88□□□□□ -2.27
SKP1P52286 YKL106C-AYKL106C-A 120 nt0.86□□□□□ -2.27
SKP1P52286 MLP1YKR095W 5628 nt0.81□□□□□ -2.28
SKP1P52286 YDL114W-AYDL114W-A 114 nt0.8□□□□□ -2.28
SKP1P52286 MLP2YIL149C 5040 nt0.79□□□□□ -2.28
SKP1P52286 YOR186C-AYOR186C-A 210 nt0.76□□□□□ -2.29
SKP1P52286 UTP10YJL109C 5310 nt0.72□□□□□ -2.29
SKP1P52286 YPR159C-AYPR159C-A 102 nt0.72□□□□□ -2.29
SKP1P52286 THO2YNL139C 4794 nt0.7□□□□□ -2.3
SKP1P52286 YML100W-AYML100W-A 174 nt0.68□□□□□ -2.3
SKP1P52286 tV(UAC)QtV(UAC)Q 76 nt0.66□□□□□ -2.3
SKP1P52286 IQG1YPL242C 4488 nt0.62□□□□□ -2.31
SKP1P52286 YMR272W-AYMR272W-A 114 nt0.6□□□□□ -2.31
SKP1P52286 YOR376W-AYOR376W-A 156 nt0.6□□□□□ -2.31
SKP1P52286 tT(AGU)BtT(AGU)B 73 nt0.58□□□□□ -2.32
SKP1P52286 tT(AGU)CtT(AGU)C 73 nt0.58□□□□□ -2.32
SKP1P52286 tT(AGU)DtT(AGU)D 73 nt0.58□□□□□ -2.32
SKP1P52286 tT(AGU)HtT(AGU)H 73 nt0.58□□□□□ -2.32
SKP1P52286 tT(AGU)I1tT(AGU)I1 73 nt0.58□□□□□ -2.32
SKP1P52286 tT(AGU)I2tT(AGU)I2 73 nt0.58□□□□□ -2.32
SKP1P52286 tT(AGU)JtT(AGU)J 73 nt0.58□□□□□ -2.32
SKP1P52286 tT(AGU)N1tT(AGU)N1 73 nt0.58□□□□□ -2.32
SKP1P52286 tT(AGU)N2tT(AGU)N2 73 nt0.58□□□□□ -2.32
SKP1P52286 tT(AGU)O1tT(AGU)O1 73 nt0.58□□□□□ -2.32
SKP1P52286 tT(AGU)O2tT(AGU)O2 73 nt0.58□□□□□ -2.32
SKP1P52286 SOV1YMR066W 2697 nt0.51□□□□□ -2.33
SKP1P52286 YOR316C-AYOR316C-A 210 nt0.5□□□□□ -2.33
SKP1P52286 PAU9YBL108C-A 129 nt0.49□□□□□ -2.33
SKP1P52286 snR77snR77 88 nt0.47□□□□□ -2.33
SKP1P52286 snR128snR128 126 nt0.47□□□□□ -2.33
SKP1P52286 SBH2YER019C-A 267 nt0.44□□□□□ -2.34
SKP1P52286 UTP20YBL004W 7482 nt0.37□□□□□ -2.35
SKP1P52286 YKL145W-AYKL145W-A 93 nt0.36□□□□□ -2.35
SKP1P52286 YOL013W-AYOL013W-A 192 nt0.36□□□□□ -2.35
SKP1P52286 snR40snR40 97 nt0.36□□□□□ -2.35
SKP1P52286 ESP1YGR098C 4893 nt0.35□□□□□ -2.35
SKP1P52286 tF(GAA)BtF(GAA)B 73 nt0.35□□□□□ -2.35
SKP1P52286 tF(GAA)FtF(GAA)F 73 nt0.35□□□□□ -2.35
SKP1P52286 tF(GAA)GtF(GAA)G 73 nt0.35□□□□□ -2.35
SKP1P52286 tF(GAA)H1tF(GAA)H1 73 nt0.35□□□□□ -2.35
SKP1P52286 tF(GAA)H2tF(GAA)H2 73 nt0.35□□□□□ -2.35
SKP1P52286 tF(GAA)MtF(GAA)M 73 nt0.35□□□□□ -2.35
SKP1P52286 tF(GAA)P1tF(GAA)P1 73 nt0.35□□□□□ -2.35
SKP1P52286 tF(GAA)P2tF(GAA)P2 73 nt0.35□□□□□ -2.35
SKP1P52286 FMP27YLR454W 7887 nt0.3□□□□□ -2.36
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms