Protein–RNA interactions for Protein: P46677

TAF1, Transcription initiation factor TFIID subunit 1, yeastyeast

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TAF1P46677 PAU12YGR294W 363 nt1.51□□□□□ -2.17
TAF1P46677 RDS3YPR094W 324 nt1.51□□□□□ -2.17
TAF1P46677 PAU24YBR301W 363 nt1.51□□□□□ -2.17
TAF1P46677 NUP145YGL092W 3954 nt1.5□□□□□ -2.17
TAF1P46677 CSE1YGL238W 2883 nt1.49□□□□□ -2.17
TAF1P46677 SEC8YPR055W 3198 nt1.49□□□□□ -2.17
TAF1P46677 tN(GUU)QtN(GUU)Q 71 nt1.49□□□□□ -2.17
TAF1P46677 LAA1YJL207C 6045 nt1.48□□□□□ -2.17
TAF1P46677 NIP1YMR309C 2439 nt1.47□□□□□ -2.17
TAF1P46677 YSP1YHR155W 3687 nt1.47□□□□□ -2.17
TAF1P46677 SEC3YER008C 4011 nt1.46□□□□□ -2.18
TAF1P46677 YLR399W-AYLR399W-A 105 nt1.45□□□□□ -2.18
TAF1P46677 ULP2YIL031W 3105 nt1.44□□□□□ -2.18
TAF1P46677 CDC39YCR093W 6327 nt1.44□□□□□ -2.18
TAF1P46677 tH(GUG)E1tH(GUG)E1 72 nt1.43□□□□□ -2.18
TAF1P46677 tH(GUG)E2tH(GUG)E2 72 nt1.43□□□□□ -2.18
TAF1P46677 tH(GUG)G1tH(GUG)G1 72 nt1.43□□□□□ -2.18
TAF1P46677 tH(GUG)G2tH(GUG)G2 72 nt1.43□□□□□ -2.18
TAF1P46677 tH(GUG)HtH(GUG)H 72 nt1.43□□□□□ -2.18
TAF1P46677 tH(GUG)KtH(GUG)K 72 nt1.43□□□□□ -2.18
TAF1P46677 tH(GUG)MtH(GUG)M 72 nt1.43□□□□□ -2.18
TAF1P46677 IML1YJR138W 4755 nt1.43□□□□□ -2.18
TAF1P46677 PET111YMR257C 2403 nt1.42□□□□□ -2.18
TAF1P46677 CDC25YLR310C 4770 nt1.41□□□□□ -2.18
TAF1P46677 YJL077W-AYJL077W-A 87 nt1.38□□□□□ -2.19
TAF1P46677 SIP4YJL089W 2490 nt1.38□□□□□ -2.19
TAF1P46677 tQ(UUG)QtQ(UUG)Q 76 nt1.37□□□□□ -2.19
TAF1P46677 BUL2YML111W 2763 nt1.34□□□□□ -2.19
TAF1P46677 tV(UAC)BtV(UAC)B 74 nt1.34□□□□□ -2.19
TAF1P46677 tV(UAC)DtV(UAC)D 74 nt1.34□□□□□ -2.19
TAF1P46677 NST1YNL091W 3723 nt1.34□□□□□ -2.2
TAF1P46677 YLL006W-AYLL006W-A 177 nt1.3□□□□□ -2.2
TAF1P46677 tF(GAA)BtF(GAA)B 73 nt1.24□□□□□ -2.21
TAF1P46677 tF(GAA)FtF(GAA)F 73 nt1.24□□□□□ -2.21
TAF1P46677 tF(GAA)GtF(GAA)G 73 nt1.24□□□□□ -2.21
TAF1P46677 tF(GAA)H1tF(GAA)H1 73 nt1.24□□□□□ -2.21
TAF1P46677 tF(GAA)H2tF(GAA)H2 73 nt1.24□□□□□ -2.21
TAF1P46677 tF(GAA)MtF(GAA)M 73 nt1.24□□□□□ -2.21
TAF1P46677 tF(GAA)P1tF(GAA)P1 73 nt1.24□□□□□ -2.21
TAF1P46677 tF(GAA)P2tF(GAA)P2 73 nt1.24□□□□□ -2.21
TAF1P46677 YER090C-AYER090C-A 90 nt1.21□□□□□ -2.22
TAF1P46677 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
TAF1P46677 YPL060C-AYPL060C-A 3315 nt1.2□□□□□ -2.22
TAF1P46677 BUD3YCL014W 4911 nt1.19□□□□□ -2.22
TAF1P46677 SPT7YBR081C 3999 nt1.18□□□□□ -2.22
TAF1P46677 SCC2YDR180W 4482 nt1.18□□□□□ -2.22
TAF1P46677 DOP1YDR141C 5097 nt1.17□□□□□ -2.22
TAF1P46677 YDL114W-AYDL114W-A 114 nt1.16□□□□□ -2.22
TAF1P46677 snR67snR67 82 nt1.15□□□□□ -2.23
TAF1P46677 YOR376W-AYOR376W-A 156 nt1.14□□□□□ -2.23
TAF1P46677 YJR029WYJR029W 5268 nt1.12□□□□□ -2.23
TAF1P46677 YPR137C-BYPR137C-B 5268 nt1.12□□□□□ -2.23
TAF1P46677 EMT1tM(CAU)D 73 nt1.12□□□□□ -2.23
TAF1P46677 EMT5tM(CAU)J1 73 nt1.12□□□□□ -2.23
TAF1P46677 EMT3tM(CAU)J2 73 nt1.12□□□□□ -2.23
TAF1P46677 EMT4tM(CAU)M 73 nt1.12□□□□□ -2.23
TAF1P46677 EMT2tM(CAU)O2 73 nt1.12□□□□□ -2.23
TAF1P46677 YKL106C-AYKL106C-A 120 nt1.1□□□□□ -2.23
TAF1P46677 MYO1YHR023W 5787 nt1.1□□□□□ -2.23
TAF1P46677 YOL014WYOL014W 375 nt1.08□□□□□ -2.24
TAF1P46677 BEM2YER155C 6504 nt1.06□□□□□ -2.24
TAF1P46677 UTP20YBL004W 7482 nt1.05□□□□□ -2.24
TAF1P46677 YNL054W-BYNL054W-B 5250 nt1.04□□□□□ -2.24
TAF1P46677 YOR192C-BYOR192C-B 5313 nt1.04□□□□□ -2.24
TAF1P46677 tV(UAC)QtV(UAC)Q 76 nt1.03□□□□□ -2.24
TAF1P46677 YMR160WYMR160W 2451 nt1.03□□□□□ -2.25
TAF1P46677 snR40snR40 97 nt1.02□□□□□ -2.25
TAF1P46677 YPR117WYPR117W 7470 nt1□□□□□ -2.25
TAF1P46677 LTE1YAL024C 4308 nt0.98□□□□□ -2.25
TAF1P46677 RKR1YMR247C 4689 nt0.98□□□□□ -2.25
TAF1P46677 YKL145W-AYKL145W-A 93 nt0.94□□□□□ -2.26
TAF1P46677 MLP2YIL149C 5040 nt0.92□□□□□ -2.26
TAF1P46677 YPR159C-AYPR159C-A 102 nt0.85□□□□□ -2.27
TAF1P46677 snR77snR77 88 nt0.8□□□□□ -2.28
TAF1P46677 YOR316C-AYOR316C-A 210 nt0.77□□□□□ -2.29
TAF1P46677 tT(AGU)BtT(AGU)B 73 nt0.76□□□□□ -2.29
TAF1P46677 tT(AGU)CtT(AGU)C 73 nt0.76□□□□□ -2.29
TAF1P46677 tT(AGU)DtT(AGU)D 73 nt0.76□□□□□ -2.29
TAF1P46677 tT(AGU)HtT(AGU)H 73 nt0.76□□□□□ -2.29
TAF1P46677 tT(AGU)I1tT(AGU)I1 73 nt0.76□□□□□ -2.29
TAF1P46677 tT(AGU)I2tT(AGU)I2 73 nt0.76□□□□□ -2.29
TAF1P46677 tT(AGU)JtT(AGU)J 73 nt0.76□□□□□ -2.29
TAF1P46677 tT(AGU)N1tT(AGU)N1 73 nt0.76□□□□□ -2.29
TAF1P46677 tT(AGU)N2tT(AGU)N2 73 nt0.76□□□□□ -2.29
TAF1P46677 tT(AGU)O1tT(AGU)O1 73 nt0.76□□□□□ -2.29
TAF1P46677 tT(AGU)O2tT(AGU)O2 73 nt0.76□□□□□ -2.29
TAF1P46677 YBL100W-BYBL100W-B 5313 nt0.75□□□□□ -2.29
TAF1P46677 SBH2YER019C-A 267 nt0.73□□□□□ -2.29
TAF1P46677 THO2YNL139C 4794 nt0.73□□□□□ -2.29
TAF1P46677 YMR272W-AYMR272W-A 114 nt0.72□□□□□ -2.29
TAF1P46677 YML100W-AYML100W-A 174 nt0.69□□□□□ -2.3
TAF1P46677 MLP1YKR095W 5628 nt0.67□□□□□ -2.3
TAF1P46677 YOR186C-AYOR186C-A 210 nt0.67□□□□□ -2.3
TAF1P46677 UTP10YJL109C 5310 nt0.67□□□□□ -2.3
TAF1P46677 IQG1YPL242C 4488 nt0.64□□□□□ -2.31
TAF1P46677 FMP27YLR454W 7887 nt0.59□□□□□ -2.32
TAF1P46677 PAU9YBL108C-A 129 nt0.58□□□□□ -2.32
TAF1P46677 SOV1YMR066W 2697 nt0.56□□□□□ -2.32
TAF1P46677 ESP1YGR098C 4893 nt0.48□□□□□ -2.33
TAF1P46677 snR128snR128 126 nt0.46□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms