Protein–RNA interactions for Protein: P40453

UBP7, Ubiquitin carboxyl-terminal hydrolase 7, yeastyeast

Predictions only

Length 1,071 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP7P40453 UTP20YBL004W 7482 nt0.95□□□□□ -2.26
UBP7P40453 YNL054W-BYNL054W-B 5250 nt0.92□□□□□ -2.26
UBP7P40453 SEC1YDR164C 2175 nt0.9□□□□□ -2.26
UBP7P40453 YJL127W-AYJL127W-A 117 nt0.9□□□□□ -2.27
UBP7P40453 SBH1YER087C-B 249 nt0.89□□□□□ -2.27
UBP7P40453 YBR072C-AYBR072C-A 162 nt0.89□□□□□ -2.27
UBP7P40453 YOL083C-AYOL083C-A 141 nt0.88□□□□□ -2.27
UBP7P40453 YBL071C-BYBL071C-B 99 nt0.87□□□□□ -2.27
UBP7P40453 YNL266WYNL266W 420 nt0.87□□□□□ -2.27
UBP7P40453 GLG1YKR058W 1851 nt0.86□□□□□ -2.27
UBP7P40453 THO2YNL139C 4794 nt0.84□□□□□ -2.28
UBP7P40453 MLP2YIL149C 5040 nt0.83□□□□□ -2.28
UBP7P40453 LTE1YAL024C 4308 nt0.83□□□□□ -2.28
UBP7P40453 YGR146C-AYGR146C-A 162 nt0.83□□□□□ -2.28
UBP7P40453 YLL006W-AYLL006W-A 177 nt0.83□□□□□ -2.28
UBP7P40453 BIR1YJR089W 2865 nt0.83□□□□□ -2.28
UBP7P40453 CSE1YGL238W 2883 nt0.82□□□□□ -2.28
UBP7P40453 YOL014WYOL014W 375 nt0.82□□□□□ -2.28
UBP7P40453 ULP2YIL031W 3105 nt0.82□□□□□ -2.28
UBP7P40453 ORC3YLL004W 1851 nt0.82□□□□□ -2.28
UBP7P40453 NNF2YGR089W 2811 nt0.81□□□□□ -2.28
UBP7P40453 YMR160WYMR160W 2451 nt0.8□□□□□ -2.28
UBP7P40453 RPS26AYGL189C 360 nt0.79□□□□□ -2.28
UBP7P40453 YAL037C-AYAL037C-A 93 nt0.78□□□□□ -2.28
UBP7P40453 snR62snR62 100 nt0.77□□□□□ -2.29
UBP7P40453 YDR034C-AYDR034C-A 177 nt0.77□□□□□ -2.29
UBP7P40453 RPM2YML091C 3609 nt0.77□□□□□ -2.29
UBP7P40453 PET111YMR257C 2403 nt0.76□□□□□ -2.29
UBP7P40453 YOL164W-AYOL164W-A 183 nt0.75□□□□□ -2.29
UBP7P40453 snR47snR47 99 nt0.73□□□□□ -2.29
UBP7P40453 YKL145W-AYKL145W-A 93 nt0.72□□□□□ -2.29
UBP7P40453 YLR286W-AYLR286W-A 135 nt0.72□□□□□ -2.29
UBP7P40453 YPR159C-AYPR159C-A 102 nt0.72□□□□□ -2.29
UBP7P40453 IQG1YPL242C 4488 nt0.72□□□□□ -2.29
UBP7P40453 tT(AGU)BtT(AGU)B 73 nt0.71□□□□□ -2.3
UBP7P40453 tT(AGU)CtT(AGU)C 73 nt0.71□□□□□ -2.3
UBP7P40453 tT(AGU)DtT(AGU)D 73 nt0.71□□□□□ -2.3
UBP7P40453 tT(AGU)HtT(AGU)H 73 nt0.71□□□□□ -2.3
UBP7P40453 tT(AGU)I1tT(AGU)I1 73 nt0.71□□□□□ -2.3
UBP7P40453 tT(AGU)I2tT(AGU)I2 73 nt0.71□□□□□ -2.3
UBP7P40453 tT(AGU)JtT(AGU)J 73 nt0.71□□□□□ -2.3
UBP7P40453 tT(AGU)N1tT(AGU)N1 73 nt0.71□□□□□ -2.3
UBP7P40453 tT(AGU)N2tT(AGU)N2 73 nt0.71□□□□□ -2.3
UBP7P40453 tT(AGU)O1tT(AGU)O1 73 nt0.71□□□□□ -2.3
UBP7P40453 tT(AGU)O2tT(AGU)O2 73 nt0.71□□□□□ -2.3
UBP7P40453 SEC10YLR166C 2616 nt0.71□□□□□ -2.3
UBP7P40453 EST1YLR233C 2100 nt0.71□□□□□ -2.3
UBP7P40453 YBR196C-AYBR196C-A 150 nt0.7□□□□□ -2.3
UBP7P40453 YGR240C-AYGR240C-A 201 nt0.69□□□□□ -2.3
UBP7P40453 NIP1YMR309C 2439 nt0.67□□□□□ -2.3
UBP7P40453 MLP1YKR095W 5628 nt0.66□□□□□ -2.3
UBP7P40453 YDL159W-AYDL159W-A 132 nt0.65□□□□□ -2.31
UBP7P40453 snR38snR38 95 nt0.65□□□□□ -2.31
UBP7P40453 snR69snR69 101 nt0.64□□□□□ -2.31
UBP7P40453 tD(GUC)QtD(GUC)Q 75 nt0.64□□□□□ -2.31
UBP7P40453 YDR371C-AYDR371C-A 105 nt0.64□□□□□ -2.31
UBP7P40453 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
UBP7P40453 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
UBP7P40453 YML054C-AYML054C-A 159 nt0.62□□□□□ -2.31
UBP7P40453 YBR109W-AYBR109W-A 225 nt0.61□□□□□ -2.31
UBP7P40453 BUL2YML111W 2763 nt0.61□□□□□ -2.31
UBP7P40453 YPL060C-AYPL060C-A 3315 nt0.6□□□□□ -2.31
UBP7P40453 FMP27YLR454W 7887 nt0.6□□□□□ -2.31
UBP7P40453 snR64snR64 101 nt0.59□□□□□ -2.31
UBP7P40453 YDL159C-BYDL159C-B 177 nt0.59□□□□□ -2.31
UBP7P40453 YJL077W-AYJL077W-A 87 nt0.59□□□□□ -2.31
UBP7P40453 YLR299C-AYLR299C-A 93 nt0.59□□□□□ -2.31
UBP7P40453 YKL225WYKL225W 348 nt0.58□□□□□ -2.32
UBP7P40453 snR50snR50 90 nt0.58□□□□□ -2.32
UBP7P40453 AI1Q0050 2505 nt0.57□□□□□ -2.32
UBP7P40453 RDS3YPR094W 324 nt0.56□□□□□ -2.32
UBP7P40453 YBL100W-CYBL100W-C 120 nt0.55□□□□□ -2.32
UBP7P40453 snR53snR53 91 nt0.54□□□□□ -2.32
UBP7P40453 tQ(UUG)QtQ(UUG)Q 76 nt0.53□□□□□ -2.32
UBP7P40453 YOR186C-AYOR186C-A 210 nt0.51□□□□□ -2.33
UBP7P40453 YHR180C-BYHR180C-B 105 nt0.5□□□□□ -2.33
UBP7P40453 RPL41AYDL184C 78 nt0.47□□□□□ -2.33
UBP7P40453 YBL100W-BYBL100W-B 5313 nt0.47□□□□□ -2.33
UBP7P40453 ESP1YGR098C 4893 nt0.46□□□□□ -2.34
UBP7P40453 YLR149C-AYLR149C-A 87 nt0.45□□□□□ -2.34
UBP7P40453 YBR296C-AYBR296C-A 120 nt0.45□□□□□ -2.34
UBP7P40453 YER090C-AYER090C-A 90 nt0.44□□□□□ -2.34
UBP7P40453 YGR122C-AYGR122C-A 129 nt0.42□□□□□ -2.34
UBP7P40453 SKI7YOR076C 2244 nt0.4□□□□□ -2.35
UBP7P40453 YER078W-AYER078W-A 165 nt0.4□□□□□ -2.35
UBP7P40453 snR67snR67 82 nt0.33□□□□□ -2.36
UBP7P40453 SOV1YMR066W 2697 nt0.3□□□□□ -2.36
UBP7P40453 YOL013W-AYOL013W-A 192 nt0.29□□□□□ -2.36
UBP7P40453 YOR376W-AYOR376W-A 156 nt0.28□□□□□ -2.36
UBP7P40453 YML100W-AYML100W-A 174 nt0.25□□□□□ -2.37
UBP7P40453 tV(UAC)QtV(UAC)Q 76 nt0.24□□□□□ -2.37
UBP7P40453 YKL096C-BYKL096C-B 150 nt0.24□□□□□ -2.37
UBP7P40453 YKL106C-AYKL106C-A 120 nt0.24□□□□□ -2.37
UBP7P40453 snR128snR128 126 nt0.22□□□□□ -2.37
UBP7P40453 snR75snR75 89 nt0.21□□□□□ -2.38
UBP7P40453 YDL114W-AYDL114W-A 114 nt0.21□□□□□ -2.38
UBP7P40453 PAU9YBL108C-A 129 nt0.15□□□□□ -2.39
UBP7P40453 YJL113WYJL113W 4647 nt0.12□□□□□ -2.39
UBP7P40453 snR77snR77 88 nt0.12□□□□□ -2.39
UBP7P40453 YOR316C-AYOR316C-A 210 nt0.07□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 44.2 ms