Protein–RNA interactions for Protein: P38781

RSC30, Chromatin structure-remodeling complex protein RSC30, yeastyeast

Predictions only

Length 883 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC30P38781 YBR109W-AYBR109W-A 225 nt1.71□□□□□ -2.14
RSC30P38781 RPL41AYDL184C 78 nt1.7□□□□□ -2.14
RSC30P38781 YML054C-AYML054C-A 159 nt1.7□□□□□ -2.14
RSC30P38781 SIP4YJL089W 2490 nt1.69□□□□□ -2.14
RSC30P38781 SPC110YDR356W 2835 nt1.68□□□□□ -2.14
RSC30P38781 NIP1YMR309C 2439 nt1.66□□□□□ -2.14
RSC30P38781 YBR296C-AYBR296C-A 120 nt1.65□□□□□ -2.15
RSC30P38781 BUL2YML111W 2763 nt1.65□□□□□ -2.15
RSC30P38781 tH(GUG)E1tH(GUG)E1 72 nt1.61□□□□□ -2.15
RSC30P38781 tH(GUG)E2tH(GUG)E2 72 nt1.61□□□□□ -2.15
RSC30P38781 tH(GUG)G1tH(GUG)G1 72 nt1.61□□□□□ -2.15
RSC30P38781 tH(GUG)G2tH(GUG)G2 72 nt1.61□□□□□ -2.15
RSC30P38781 tH(GUG)HtH(GUG)H 72 nt1.61□□□□□ -2.15
RSC30P38781 tH(GUG)KtH(GUG)K 72 nt1.61□□□□□ -2.15
RSC30P38781 tH(GUG)MtH(GUG)M 72 nt1.61□□□□□ -2.15
RSC30P38781 tV(UAC)BtV(UAC)B 74 nt1.61□□□□□ -2.15
RSC30P38781 tV(UAC)DtV(UAC)D 74 nt1.61□□□□□ -2.15
RSC30P38781 tQ(UUG)QtQ(UUG)Q 76 nt1.6□□□□□ -2.15
RSC30P38781 DOP1YDR141C 5097 nt1.6□□□□□ -2.15
RSC30P38781 SPT7YBR081C 3999 nt1.59□□□□□ -2.15
RSC30P38781 IRA1YBR140C 9279 nt1.58□□□□□ -2.16
RSC30P38781 HKR1YDR420W 5409 nt1.56□□□□□ -2.16
RSC30P38781 tF(GAA)BtF(GAA)B 73 nt1.55□□□□□ -2.16
RSC30P38781 tF(GAA)FtF(GAA)F 73 nt1.55□□□□□ -2.16
RSC30P38781 tF(GAA)GtF(GAA)G 73 nt1.55□□□□□ -2.16
RSC30P38781 tF(GAA)H1tF(GAA)H1 73 nt1.55□□□□□ -2.16
RSC30P38781 tF(GAA)H2tF(GAA)H2 73 nt1.55□□□□□ -2.16
RSC30P38781 tF(GAA)MtF(GAA)M 73 nt1.55□□□□□ -2.16
RSC30P38781 tF(GAA)P1tF(GAA)P1 73 nt1.55□□□□□ -2.16
RSC30P38781 tF(GAA)P2tF(GAA)P2 73 nt1.55□□□□□ -2.16
RSC30P38781 UTP20YBL004W 7482 nt1.53□□□□□ -2.16
RSC30P38781 SKI7YOR076C 2244 nt1.53□□□□□ -2.16
RSC30P38781 NST1YNL091W 3723 nt1.53□□□□□ -2.17
RSC30P38781 YKL096C-BYKL096C-B 150 nt1.49□□□□□ -2.17
RSC30P38781 snR38snR38 95 nt1.49□□□□□ -2.17
RSC30P38781 YLR149C-AYLR149C-A 87 nt1.46□□□□□ -2.18
RSC30P38781 YDL159W-AYDL159W-A 132 nt1.43□□□□□ -2.18
RSC30P38781 YPL060C-AYPL060C-A 3315 nt1.43□□□□□ -2.18
RSC30P38781 AI1Q0050 2505 nt1.42□□□□□ -2.18
RSC30P38781 BUD3YCL014W 4911 nt1.41□□□□□ -2.18
RSC30P38781 YGR122C-AYGR122C-A 129 nt1.4□□□□□ -2.19
RSC30P38781 YER090C-AYER090C-A 90 nt1.39□□□□□ -2.19
RSC30P38781 tQ(UUG)E2tQ(UUG)E2 72 nt1.37□□□□□ -2.19
RSC30P38781 YOL014WYOL014W 375 nt1.34□□□□□ -2.19
RSC30P38781 YOR192C-BYOR192C-B 5313 nt1.33□□□□□ -2.2
RSC30P38781 snR75snR75 89 nt1.32□□□□□ -2.2
RSC30P38781 RKR1YMR247C 4689 nt1.32□□□□□ -2.2
RSC30P38781 SCC2YDR180W 4482 nt1.3□□□□□ -2.2
RSC30P38781 YER078W-AYER078W-A 165 nt1.29□□□□□ -2.2
RSC30P38781 PET111YMR257C 2403 nt1.27□□□□□ -2.21
RSC30P38781 snR67snR67 82 nt1.27□□□□□ -2.21
RSC30P38781 YPR117WYPR117W 7470 nt1.27□□□□□ -2.21
RSC30P38781 LTE1YAL024C 4308 nt1.25□□□□□ -2.21
RSC30P38781 MLP2YIL149C 5040 nt1.24□□□□□ -2.21
RSC30P38781 VAM6YDL077C 3150 nt1.22□□□□□ -2.21
RSC30P38781 YMR160WYMR160W 2451 nt1.17□□□□□ -2.22
RSC30P38781 YJR029WYJR029W 5268 nt1.13□□□□□ -2.23
RSC30P38781 YPR137C-BYPR137C-B 5268 nt1.13□□□□□ -2.23
RSC30P38781 YKL145W-AYKL145W-A 93 nt1.11□□□□□ -2.23
RSC30P38781 EMT1tM(CAU)D 73 nt1.09□□□□□ -2.23
RSC30P38781 EMT5tM(CAU)J1 73 nt1.09□□□□□ -2.23
RSC30P38781 EMT3tM(CAU)J2 73 nt1.09□□□□□ -2.23
RSC30P38781 EMT4tM(CAU)M 73 nt1.09□□□□□ -2.23
RSC30P38781 EMT2tM(CAU)O2 73 nt1.09□□□□□ -2.23
RSC30P38781 MLP1YKR095W 5628 nt1.09□□□□□ -2.24
RSC30P38781 YNL054W-BYNL054W-B 5250 nt1.06□□□□□ -2.24
RSC30P38781 BEM2YER155C 6504 nt1.02□□□□□ -2.25
RSC30P38781 YKL106C-AYKL106C-A 120 nt1.01□□□□□ -2.25
RSC30P38781 YBL100W-BYBL100W-B 5313 nt0.99□□□□□ -2.25
RSC30P38781 YOR186C-AYOR186C-A 210 nt0.96□□□□□ -2.26
RSC30P38781 MYO1YHR023W 5787 nt0.92□□□□□ -2.26
RSC30P38781 YDL114W-AYDL114W-A 114 nt0.91□□□□□ -2.26
RSC30P38781 THO2YNL139C 4794 nt0.9□□□□□ -2.27
RSC30P38781 YPR159C-AYPR159C-A 102 nt0.86□□□□□ -2.27
RSC30P38781 tT(AGU)BtT(AGU)B 73 nt0.85□□□□□ -2.27
RSC30P38781 tT(AGU)CtT(AGU)C 73 nt0.85□□□□□ -2.27
RSC30P38781 tT(AGU)DtT(AGU)D 73 nt0.85□□□□□ -2.27
RSC30P38781 tT(AGU)HtT(AGU)H 73 nt0.85□□□□□ -2.27
RSC30P38781 tT(AGU)I1tT(AGU)I1 73 nt0.85□□□□□ -2.27
RSC30P38781 tT(AGU)I2tT(AGU)I2 73 nt0.85□□□□□ -2.27
RSC30P38781 tT(AGU)JtT(AGU)J 73 nt0.85□□□□□ -2.27
RSC30P38781 tT(AGU)N1tT(AGU)N1 73 nt0.85□□□□□ -2.27
RSC30P38781 tT(AGU)N2tT(AGU)N2 73 nt0.85□□□□□ -2.27
RSC30P38781 tT(AGU)O1tT(AGU)O1 73 nt0.85□□□□□ -2.27
RSC30P38781 tT(AGU)O2tT(AGU)O2 73 nt0.85□□□□□ -2.27
RSC30P38781 IQG1YPL242C 4488 nt0.78□□□□□ -2.28
RSC30P38781 YML100W-AYML100W-A 174 nt0.77□□□□□ -2.29
RSC30P38781 FMP27YLR454W 7887 nt0.75□□□□□ -2.29
RSC30P38781 UTP10YJL109C 5310 nt0.74□□□□□ -2.29
RSC30P38781 tV(UAC)QtV(UAC)Q 76 nt0.72□□□□□ -2.29
RSC30P38781 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
RSC30P38781 YOR376W-AYOR376W-A 156 nt0.64□□□□□ -2.31
RSC30P38781 YOR316C-AYOR316C-A 210 nt0.59□□□□□ -2.31
RSC30P38781 PAU9YBL108C-A 129 nt0.56□□□□□ -2.32
RSC30P38781 snR128snR128 126 nt0.55□□□□□ -2.32
RSC30P38781 SOV1YMR066W 2697 nt0.55□□□□□ -2.32
RSC30P38781 SBH2YER019C-A 267 nt0.54□□□□□ -2.32
RSC30P38781 snR77snR77 88 nt0.52□□□□□ -2.33
RSC30P38781 ESP1YGR098C 4893 nt0.47□□□□□ -2.33
RSC30P38781 YOL013W-AYOL013W-A 192 nt0.44□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 44.6 ms