Protein–RNA interactions for Protein: P38298

YPC1, Alkaline ceramidase YPC1, yeastyeast

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPC1P38298 TFB5YDR079C-A 219 nt-0.4□□□□□ -2.47
YPC1P38298 YOR302WYOR302W 78 nt-0.41□□□□□ -2.48
YPC1P38298 snR39BsnR39B 96 nt-0.44□□□□□ -2.48
YPC1P38298 YGR146C-AYGR146C-A 162 nt-0.45□□□□□ -2.48
YPC1P38298 YIL071W-AYIL071W-A 477 nt-0.46□□□□□ -2.48
YPC1P38298 SEC10YLR166C 2616 nt-0.46□□□□□ -2.48
YPC1P38298 tQ(UUG)QtQ(UUG)Q 76 nt-0.47□□□□□ -2.48
YPC1P38298 YNL067W-BYNL067W-B 141 nt-0.47□□□□□ -2.48
YPC1P38298 URB1YKL014C 5295 nt-0.47□□□□□ -2.49
YPC1P38298 YDL007C-AYDL007C-A 258 nt-0.49□□□□□ -2.49
YPC1P38298 snR69snR69 101 nt-0.49□□□□□ -2.49
YPC1P38298 YML100W-AYML100W-A 174 nt-0.49□□□□□ -2.49
YPC1P38298 YLR342W-AYLR342W-A 174 nt-0.52□□□□□ -2.49
YPC1P38298 YOR329W-AYOR329W-A 210 nt-0.52□□□□□ -2.49
YPC1P38298 PAU9YBL108C-A 129 nt-0.53□□□□□ -2.49
YPC1P38298 snR46snR46 197 nt-0.53□□□□□ -2.49
YPC1P38298 tA(UGC)QtA(UGC)Q 76 nt-0.54□□□□□ -2.5
YPC1P38298 snR52snR52 92 nt-0.55□□□□□ -2.5
YPC1P38298 PMP2YEL017C-A 132 nt-0.56□□□□□ -2.5
YPC1P38298 snR80snR80 171 nt-0.57□□□□□ -2.5
YPC1P38298 Q0142Q0142 177 nt-0.57□□□□□ -2.5
YPC1P38298 RDS3YPR094W 324 nt-0.57□□□□□ -2.5
YPC1P38298 snR48snR48 113 nt-0.58□□□□□ -2.5
YPC1P38298 YJL113WYJL113W 4647 nt-0.6□□□□□ -2.51
YPC1P38298 YER090C-AYER090C-A 90 nt-0.61□□□□□ -2.51
YPC1P38298 snR50snR50 90 nt-0.62□□□□□ -2.51
YPC1P38298 YNL205CYNL205C 423 nt-0.65□□□□□ -2.51
YPC1P38298 YNL266WYNL266W 420 nt-0.65□□□□□ -2.51
YPC1P38298 YHL009W-BYHL009W-B 5409 nt-0.67□□□□□ -2.52
YPC1P38298 JLP2YMR132C 627 nt-0.67□□□□□ -2.52
YPC1P38298 YDR406W-AYDR406W-A 246 nt-0.68□□□□□ -2.52
YPC1P38298 YHL015W-AYHL015W-A 84 nt-0.68□□□□□ -2.52
YPC1P38298 YOR102WYOR102W 351 nt-0.68□□□□□ -2.52
YPC1P38298 tD(GUC)QtD(GUC)Q 75 nt-0.69□□□□□ -2.52
YPC1P38298 snR33snR33 183 nt-0.71□□□□□ -2.52
YPC1P38298 tL(UAA)QtL(UAA)Q 85 nt-0.72□□□□□ -2.52
YPC1P38298 YLR286W-AYLR286W-A 135 nt-0.76□□□□□ -2.53
YPC1P38298 tT(UGU)G1tT(UGU)G1 72 nt-0.77□□□□□ -2.53
YPC1P38298 tT(UGU)G2tT(UGU)G2 72 nt-0.77□□□□□ -2.53
YPC1P38298 tT(UGU)PtT(UGU)P 72 nt-0.77□□□□□ -2.53
YPC1P38298 YBR178WYBR178W 375 nt-0.77□□□□□ -2.53
YPC1P38298 snR67snR67 82 nt-0.8□□□□□ -2.54
YPC1P38298 YDL159C-BYDL159C-B 177 nt-0.8□□□□□ -2.54
YPC1P38298 SKI7YOR076C 2244 nt-0.85□□□□□ -2.55
YPC1P38298 YMR046W-AYMR046W-A 129 nt-0.85□□□□□ -2.55
YPC1P38298 snR161snR161 161 nt-0.88□□□□□ -2.55
YPC1P38298 YNL198CYNL198C 303 nt-0.91□□□□□ -2.56
YPC1P38298 YBR196C-AYBR196C-A 150 nt-0.91□□□□□ -2.56
YPC1P38298 YJL150WYJL150W 303 nt-0.93□□□□□ -2.56
YPC1P38298 YLR299C-AYLR299C-A 93 nt-0.94□□□□□ -2.56
YPC1P38298 SPG3YDR504C 384 nt-0.97□□□□□ -2.56
YPC1P38298 tP(UGG)QtP(UGG)Q 72 nt-0.99□□□□□ -2.57
YPC1P38298 SOM1YEL059C-A 225 nt-1.02□□□□□ -2.57
YPC1P38298 tM(CAU)Q1tM(CAU)Q1 76 nt-1.02□□□□□ -2.57
YPC1P38298 YBL053WYBL053W 375 nt-1.02□□□□□ -2.57
YPC1P38298 YML054C-AYML054C-A 159 nt-1.05□□□□□ -2.58
YPC1P38298 YCR095W-AYCR095W-A 159 nt-1.06□□□□□ -2.58
YPC1P38298 YBR223W-AYBR223W-A 120 nt-1.13□□□□□ -2.59
YPC1P38298 snR77snR77 88 nt-1.17□□□□□ -2.6
YPC1P38298 YHR180C-BYHR180C-B 105 nt-1.17□□□□□ -2.6
YPC1P38298 YOR376W-AYOR376W-A 156 nt-1.19□□□□□ -2.6
YPC1P38298 CDC65tQ(CUG)M 72 nt-1.2□□□□□ -2.6
YPC1P38298 YGR240C-AYGR240C-A 201 nt-1.25□□□□□ -2.61
YPC1P38298 YLR466C-BYLR466C-B 117 nt-1.25□□□□□ -2.61
YPC1P38298 YGR151CYGR151C 336 nt-1.27□□□□□ -2.61
YPC1P38298 YMR315W-AYMR315W-A 108 nt-1.34□□□□□ -2.62
YPC1P38298 snR81snR81 201 nt-1.35□□□□□ -2.63
YPC1P38298 YKL106C-AYKL106C-A 120 nt-1.36□□□□□ -2.63
YPC1P38298 tY(GUA)QtY(GUA)Q 84 nt-1.37□□□□□ -2.63
YPC1P38298 YBR109W-AYBR109W-A 225 nt-1.37□□□□□ -2.63
YPC1P38298 YOL083C-AYOL083C-A 141 nt-1.39□□□□□ -2.63
YPC1P38298 YOR316C-AYOR316C-A 210 nt-1.39□□□□□ -2.63
YPC1P38298 RPL41AYDL184C 78 nt-1.4□□□□□ -2.63
YPC1P38298 YNL338WYNL338W 159 nt-1.4□□□□□ -2.63
YPC1P38298 YCL001W-BYCL001W-B 255 nt-1.41□□□□□ -2.64
YPC1P38298 YBL071C-BYBL071C-B 99 nt-1.42□□□□□ -2.64
YPC1P38298 YBR296C-AYBR296C-A 120 nt-1.42□□□□□ -2.64
YPC1P38298 snR38snR38 95 nt-1.45□□□□□ -2.64
YPC1P38298 YOL164W-AYOL164W-A 183 nt-1.47□□□□□ -2.64
YPC1P38298 YNL337WYNL337W 255 nt-1.48□□□□□ -2.65
YPC1P38298 YAL037C-AYAL037C-A 93 nt-1.53□□□□□ -2.65
YPC1P38298 snR47snR47 99 nt-1.54□□□□□ -2.66
YPC1P38298 Q0032Q0032 291 nt-1.56□□□□□ -2.66
YPC1P38298 YBL100W-CYBL100W-C 120 nt-1.59□□□□□ -2.66
YPC1P38298 YOR309CYOR309C 381 nt-1.6□□□□□ -2.67
YPC1P38298 YNR077CYNR077C 255 nt-1.67□□□□□ -2.68
YPC1P38298 YGL007C-AYGL007C-A 87 nt-1.7□□□□□ -2.68
YPC1P38298 tS(GCU)Q1tS(GCU)Q1 86 nt-1.71□□□□□ -2.68
YPC1P38298 snR6snR6 112 nt-1.76□□□□□ -2.69
YPC1P38298 YKL225WYKL225W 348 nt-1.77□□□□□ -2.69
YPC1P38298 YOR335W-AYOR335W-A 81 nt-1.85□□□□□ -2.71
YPC1P38298 YNL103W-AYNL103W-A 90 nt-1.87□□□□□ -2.71
YPC1P38298 YGL041C-BYGL041C-B 183 nt-1.88□□□□□ -2.71
YPC1P38298 YBR126W-BYBR126W-B 144 nt-1.89□□□□□ -2.71
YPC1P38298 YDL114W-AYDL114W-A 114 nt-1.9□□□□□ -2.71
YPC1P38298 tV(UAC)QtV(UAC)Q 76 nt-1.91□□□□□ -2.72
YPC1P38298 snR73snR73 106 nt-1.92□□□□□ -2.72
YPC1P38298 YDR034C-AYDR034C-A 177 nt-1.94□□□□□ -2.72
YPC1P38298 RPL41BYDL133C-A 78 nt-1.95□□□□□ -2.72
YPC1P38298 snR61snR61 90 nt-1.96□□□□□ -2.72
Retrieved 100 of 7,029 protein–RNA pairs in 46.5 ms