Protein–RNA interactions for Protein: P23501

YSR3, Dihydrosphingosine 1-phosphate phosphatase YSR3, yeastyeast

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YSR3P23501 tA(UGC)QtA(UGC)Q 76 nt-0.73□□□□□ -2.53
YSR3P23501 YNL067W-BYNL067W-B 141 nt-0.73□□□□□ -2.53
YSR3P23501 YNL097C-BYNL097C-B 123 nt-0.74□□□□□ -2.53
YSR3P23501 snR33snR33 183 nt-0.74□□□□□ -2.53
YSR3P23501 snR69snR69 101 nt-0.76□□□□□ -2.53
YSR3P23501 tM(CAU)Q2tM(CAU)Q2 78 nt-0.76□□□□□ -2.53
YSR3P23501 snR56snR56 88 nt-0.78□□□□□ -2.53
YSR3P23501 tR(ACG)Q2tR(ACG)Q2 74 nt-0.78□□□□□ -2.53
YSR3P23501 YOL155W-AYOL155W-A 135 nt-0.78□□□□□ -2.53
YSR3P23501 YGR146C-AYGR146C-A 162 nt-0.79□□□□□ -2.54
YSR3P23501 YPL152W-AYPL152W-A 99 nt-0.79□□□□□ -2.54
YSR3P23501 tQ(UUG)QtQ(UUG)Q 76 nt-0.8□□□□□ -2.54
YSR3P23501 tT(UGU)G1tT(UGU)G1 72 nt-0.82□□□□□ -2.54
YSR3P23501 tT(UGU)G2tT(UGU)G2 72 nt-0.82□□□□□ -2.54
YSR3P23501 tT(UGU)PtT(UGU)P 72 nt-0.82□□□□□ -2.54
YSR3P23501 snR39BsnR39B 96 nt-0.85□□□□□ -2.55
YSR3P23501 PAU9YBL108C-A 129 nt-0.86□□□□□ -2.55
YSR3P23501 PMP2YEL017C-A 132 nt-0.87□□□□□ -2.55
YSR3P23501 YER090C-AYER090C-A 90 nt-0.87□□□□□ -2.55
YSR3P23501 RDS3YPR094W 324 nt-0.88□□□□□ -2.55
YSR3P23501 YOR302WYOR302W 78 nt-0.89□□□□□ -2.55
YSR3P23501 YOR329W-AYOR329W-A 210 nt-0.91□□□□□ -2.56
YSR3P23501 YNL266WYNL266W 420 nt-0.95□□□□□ -2.56
YSR3P23501 YNR077CYNR077C 255 nt-0.95□□□□□ -2.56
YSR3P23501 YGL188C-AYGL188C-A 141 nt-0.96□□□□□ -2.56
YSR3P23501 snR48snR48 113 nt-0.98□□□□□ -2.57
YSR3P23501 snR50snR50 90 nt-0.98□□□□□ -2.57
YSR3P23501 YOR231C-AYOR231C-A 201 nt-0.99□□□□□ -2.57
YSR3P23501 YDR524W-CYDR524W-C 90 nt-1□□□□□ -2.57
YSR3P23501 YBR223W-AYBR223W-A 120 nt-1.03□□□□□ -2.57
YSR3P23501 snR161snR161 161 nt-1.04□□□□□ -2.58
YSR3P23501 tD(GUC)QtD(GUC)Q 75 nt-1.05□□□□□ -2.58
YSR3P23501 JLP2YMR132C 627 nt-1.06□□□□□ -2.58
YSR3P23501 YNL205CYNL205C 423 nt-1.06□□□□□ -2.58
YSR3P23501 YLR342W-AYLR342W-A 174 nt-1.09□□□□□ -2.58
YSR3P23501 snR67snR67 82 nt-1.11□□□□□ -2.59
YSR3P23501 YLR286W-AYLR286W-A 135 nt-1.11□□□□□ -2.59
YSR3P23501 tL(UAA)QtL(UAA)Q 85 nt-1.13□□□□□ -2.59
YSR3P23501 snR52snR52 92 nt-1.13□□□□□ -2.59
YSR3P23501 tP(UGG)QtP(UGG)Q 72 nt-1.14□□□□□ -2.59
YSR3P23501 snR80snR80 171 nt-1.16□□□□□ -2.6
YSR3P23501 YOR102WYOR102W 351 nt-1.17□□□□□ -2.6
YSR3P23501 YBR178WYBR178W 375 nt-1.17□□□□□ -2.6
YSR3P23501 YDL159C-BYDL159C-B 177 nt-1.19□□□□□ -2.6
YSR3P23501 YHL015W-AYHL015W-A 84 nt-1.23□□□□□ -2.61
YSR3P23501 SKI7YOR076C 2244 nt-1.25□□□□□ -2.61
YSR3P23501 YLR299C-AYLR299C-A 93 nt-1.35□□□□□ -2.63
YSR3P23501 YBR196C-AYBR196C-A 150 nt-1.36□□□□□ -2.63
YSR3P23501 YDR406W-AYDR406W-A 246 nt-1.37□□□□□ -2.63
YSR3P23501 YNL198CYNL198C 303 nt-1.41□□□□□ -2.64
YSR3P23501 tY(GUA)QtY(GUA)Q 84 nt-1.43□□□□□ -2.64
YSR3P23501 YML054C-AYML054C-A 159 nt-1.45□□□□□ -2.64
YSR3P23501 YJL150WYJL150W 303 nt-1.53□□□□□ -2.65
YSR3P23501 CDC65tQ(CUG)M 72 nt-1.57□□□□□ -2.66
YSR3P23501 SOM1YEL059C-A 225 nt-1.59□□□□□ -2.66
YSR3P23501 Q0142Q0142 177 nt-1.59□□□□□ -2.66
YSR3P23501 YMR046W-AYMR046W-A 129 nt-1.59□□□□□ -2.66
YSR3P23501 YGR240C-AYGR240C-A 201 nt-1.61□□□□□ -2.67
YSR3P23501 YCR095W-AYCR095W-A 159 nt-1.63□□□□□ -2.67
YSR3P23501 YBL053WYBL053W 375 nt-1.63□□□□□ -2.67
YSR3P23501 snR77snR77 88 nt-1.65□□□□□ -2.67
YSR3P23501 snR81snR81 201 nt-1.65□□□□□ -2.67
YSR3P23501 YHR180C-BYHR180C-B 105 nt-1.66□□□□□ -2.68
YSR3P23501 YMR315W-AYMR315W-A 108 nt-1.68□□□□□ -2.68
YSR3P23501 YOR376W-AYOR376W-A 156 nt-1.75□□□□□ -2.69
YSR3P23501 SPG3YDR504C 384 nt-1.78□□□□□ -2.69
YSR3P23501 tM(CAU)Q1tM(CAU)Q1 76 nt-1.83□□□□□ -2.7
YSR3P23501 YOR316C-AYOR316C-A 210 nt-1.9□□□□□ -2.71
YSR3P23501 YKL106C-AYKL106C-A 120 nt-1.91□□□□□ -2.72
YSR3P23501 YBR126W-BYBR126W-B 144 nt-1.95□□□□□ -2.72
YSR3P23501 YBR296C-AYBR296C-A 120 nt-1.95□□□□□ -2.72
YSR3P23501 YGR151CYGR151C 336 nt-1.96□□□□□ -2.72
YSR3P23501 YOR309CYOR309C 381 nt-1.98□□□□□ -2.73
YSR3P23501 YBR109W-AYBR109W-A 225 nt-1.98□□□□□ -2.73
YSR3P23501 RPL41AYDL184C 78 nt-1.99□□□□□ -2.73
YSR3P23501 YLR466C-BYLR466C-B 117 nt-2.03□□□□□ -2.73
YSR3P23501 YOL083C-AYOL083C-A 141 nt-2.03□□□□□ -2.73
YSR3P23501 YBL071C-BYBL071C-B 99 nt-2.04□□□□□ -2.74
YSR3P23501 YCL001W-BYCL001W-B 255 nt-2.07□□□□□ -2.74
YSR3P23501 YAL037C-AYAL037C-A 93 nt-2.12□□□□□ -2.75
YSR3P23501 YOL164W-AYOL164W-A 183 nt-2.12□□□□□ -2.75
YSR3P23501 snR38snR38 95 nt-2.12□□□□□ -2.75
YSR3P23501 YNL338WYNL338W 159 nt-2.22□□□□□ -2.76
YSR3P23501 YBL100W-CYBL100W-C 120 nt-2.25□□□□□ -2.77
YSR3P23501 snR47snR47 99 nt-2.27□□□□□ -2.77
YSR3P23501 YNL337WYNL337W 255 nt-2.34□□□□□ -2.78
YSR3P23501 YDR543CYDR543C 300 nt-2.39□□□□□ -2.79
YSR3P23501 YOL166W-AYOL166W-A 156 nt-2.41□□□□□ -2.8
YSR3P23501 Q0032Q0032 291 nt-2.45□□□□□ -2.8
YSR3P23501 snR6snR6 112 nt-2.47□□□□□ -2.8
YSR3P23501 YKL225WYKL225W 348 nt-2.53□□□□□ -2.81
YSR3P23501 YOR335W-AYOR335W-A 81 nt-2.55□□□□□ -2.82
YSR3P23501 snR73snR73 106 nt-2.57□□□□□ -2.82
YSR3P23501 RPL41BYDL133C-A 78 nt-2.58□□□□□ -2.82
YSR3P23501 tS(GCU)Q1tS(GCU)Q1 86 nt-2.58□□□□□ -2.82
YSR3P23501 YGL007C-AYGL007C-A 87 nt-2.61□□□□□ -2.83
YSR3P23501 YGL041C-BYGL041C-B 183 nt-2.67□□□□□ -2.84
YSR3P23501 snR61snR61 90 nt-2.7□□□□□ -2.84
YSR3P23501 YDL114W-AYDL114W-A 114 nt-2.7□□□□□ -2.84
YSR3P23501 tV(UAC)QtV(UAC)Q 76 nt-2.7□□□□□ -2.84
Retrieved 100 of 7,029 protein–RNA pairs in 41.2 ms