Protein–RNA interactions for Protein: P06843

SPT2, Protein SPT2, yeastyeast

Predicted RBP Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT2P06843 RPL41AYDL184C 78 nt1.61□□□□□ -2.15
SPT2P06843 PAU12YGR294W 363 nt1.6□□□□□ -2.15
SPT2P06843 YLL006W-AYLL006W-A 177 nt1.6□□□□□ -2.15
SPT2P06843 PAU24YBR301W 363 nt1.6□□□□□ -2.15
SPT2P06843 LAA1YJL207C 6045 nt1.57□□□□□ -2.16
SPT2P06843 NIP1YMR309C 2439 nt1.57□□□□□ -2.16
SPT2P06843 SIP4YJL089W 2490 nt1.56□□□□□ -2.16
SPT2P06843 IML1YJR138W 4755 nt1.55□□□□□ -2.16
SPT2P06843 YJL077W-AYJL077W-A 87 nt1.55□□□□□ -2.16
SPT2P06843 YBR296C-AYBR296C-A 120 nt1.55□□□□□ -2.16
SPT2P06843 BUL2YML111W 2763 nt1.54□□□□□ -2.16
SPT2P06843 YPL060C-AYPL060C-A 3315 nt1.52□□□□□ -2.17
SPT2P06843 SPT7YBR081C 3999 nt1.51□□□□□ -2.17
SPT2P06843 NST1YNL091W 3723 nt1.51□□□□□ -2.17
SPT2P06843 tH(GUG)E1tH(GUG)E1 72 nt1.5□□□□□ -2.17
SPT2P06843 tH(GUG)E2tH(GUG)E2 72 nt1.5□□□□□ -2.17
SPT2P06843 tH(GUG)G1tH(GUG)G1 72 nt1.5□□□□□ -2.17
SPT2P06843 tH(GUG)G2tH(GUG)G2 72 nt1.5□□□□□ -2.17
SPT2P06843 tH(GUG)HtH(GUG)H 72 nt1.5□□□□□ -2.17
SPT2P06843 tH(GUG)KtH(GUG)K 72 nt1.5□□□□□ -2.17
SPT2P06843 tH(GUG)MtH(GUG)M 72 nt1.5□□□□□ -2.17
SPT2P06843 tQ(UUG)QtQ(UUG)Q 76 nt1.5□□□□□ -2.17
SPT2P06843 snR38snR38 95 nt1.5□□□□□ -2.17
SPT2P06843 YDL159W-AYDL159W-A 132 nt1.48□□□□□ -2.17
SPT2P06843 YLR149C-AYLR149C-A 87 nt1.48□□□□□ -2.17
SPT2P06843 AI1Q0050 2505 nt1.46□□□□□ -2.18
SPT2P06843 SKI7YOR076C 2244 nt1.46□□□□□ -2.18
SPT2P06843 tV(UAC)BtV(UAC)B 74 nt1.45□□□□□ -2.18
SPT2P06843 tV(UAC)DtV(UAC)D 74 nt1.45□□□□□ -2.18
SPT2P06843 YKL096C-BYKL096C-B 150 nt1.43□□□□□ -2.18
SPT2P06843 MYO1YHR023W 5787 nt1.41□□□□□ -2.18
SPT2P06843 YGR122C-AYGR122C-A 129 nt1.37□□□□□ -2.19
SPT2P06843 RKR1YMR247C 4689 nt1.36□□□□□ -2.19
SPT2P06843 BUD3YCL014W 4911 nt1.35□□□□□ -2.19
SPT2P06843 YOR192C-BYOR192C-B 5313 nt1.34□□□□□ -2.19
SPT2P06843 YPR117WYPR117W 7470 nt1.33□□□□□ -2.2
SPT2P06843 DOP1YDR141C 5097 nt1.32□□□□□ -2.2
SPT2P06843 tF(GAA)BtF(GAA)B 73 nt1.32□□□□□ -2.2
SPT2P06843 tF(GAA)FtF(GAA)F 73 nt1.32□□□□□ -2.2
SPT2P06843 tF(GAA)GtF(GAA)G 73 nt1.32□□□□□ -2.2
SPT2P06843 tF(GAA)H1tF(GAA)H1 73 nt1.32□□□□□ -2.2
SPT2P06843 tF(GAA)H2tF(GAA)H2 73 nt1.32□□□□□ -2.2
SPT2P06843 tF(GAA)MtF(GAA)M 73 nt1.32□□□□□ -2.2
SPT2P06843 tF(GAA)P1tF(GAA)P1 73 nt1.32□□□□□ -2.2
SPT2P06843 tF(GAA)P2tF(GAA)P2 73 nt1.32□□□□□ -2.2
SPT2P06843 YER090C-AYER090C-A 90 nt1.32□□□□□ -2.2
SPT2P06843 YER078W-AYER078W-A 165 nt1.31□□□□□ -2.2
SPT2P06843 YNL054W-BYNL054W-B 5250 nt1.3□□□□□ -2.2
SPT2P06843 snR75snR75 89 nt1.3□□□□□ -2.2
SPT2P06843 VAM6YDL077C 3150 nt1.29□□□□□ -2.2
SPT2P06843 UTP20YBL004W 7482 nt1.25□□□□□ -2.21
SPT2P06843 BEM2YER155C 6504 nt1.25□□□□□ -2.21
SPT2P06843 SCC2YDR180W 4482 nt1.23□□□□□ -2.21
SPT2P06843 YJR029WYJR029W 5268 nt1.21□□□□□ -2.22
SPT2P06843 YPR137C-BYPR137C-B 5268 nt1.21□□□□□ -2.22
SPT2P06843 EMT1tM(CAU)D 73 nt1.18□□□□□ -2.22
SPT2P06843 EMT5tM(CAU)J1 73 nt1.18□□□□□ -2.22
SPT2P06843 EMT3tM(CAU)J2 73 nt1.18□□□□□ -2.22
SPT2P06843 EMT4tM(CAU)M 73 nt1.18□□□□□ -2.22
SPT2P06843 EMT2tM(CAU)O2 73 nt1.18□□□□□ -2.22
SPT2P06843 snR67snR67 82 nt1.17□□□□□ -2.22
SPT2P06843 PET111YMR257C 2403 nt1.16□□□□□ -2.22
SPT2P06843 YOL014WYOL014W 375 nt1.13□□□□□ -2.23
SPT2P06843 LTE1YAL024C 4308 nt1.1□□□□□ -2.23
SPT2P06843 YMR160WYMR160W 2451 nt1.01□□□□□ -2.25
SPT2P06843 YBL100W-BYBL100W-B 5313 nt1□□□□□ -2.25
SPT2P06843 YKL145W-AYKL145W-A 93 nt0.98□□□□□ -2.25
SPT2P06843 YKL106C-AYKL106C-A 120 nt0.95□□□□□ -2.26
SPT2P06843 MLP1YKR095W 5628 nt0.89□□□□□ -2.27
SPT2P06843 YDL114W-AYDL114W-A 114 nt0.89□□□□□ -2.27
SPT2P06843 MLP2YIL149C 5040 nt0.87□□□□□ -2.27
SPT2P06843 YOR186C-AYOR186C-A 210 nt0.82□□□□□ -2.28
SPT2P06843 YMR272W-AYMR272W-A 114 nt0.81□□□□□ -2.28
SPT2P06843 YPR159C-AYPR159C-A 102 nt0.81□□□□□ -2.28
SPT2P06843 IQG1YPL242C 4488 nt0.8□□□□□ -2.28
SPT2P06843 tT(AGU)BtT(AGU)B 73 nt0.76□□□□□ -2.29
SPT2P06843 tT(AGU)CtT(AGU)C 73 nt0.76□□□□□ -2.29
SPT2P06843 tT(AGU)DtT(AGU)D 73 nt0.76□□□□□ -2.29
SPT2P06843 tT(AGU)HtT(AGU)H 73 nt0.76□□□□□ -2.29
SPT2P06843 tT(AGU)I1tT(AGU)I1 73 nt0.76□□□□□ -2.29
SPT2P06843 tT(AGU)I2tT(AGU)I2 73 nt0.76□□□□□ -2.29
SPT2P06843 tT(AGU)JtT(AGU)J 73 nt0.76□□□□□ -2.29
SPT2P06843 tT(AGU)N1tT(AGU)N1 73 nt0.76□□□□□ -2.29
SPT2P06843 tT(AGU)N2tT(AGU)N2 73 nt0.76□□□□□ -2.29
SPT2P06843 tT(AGU)O1tT(AGU)O1 73 nt0.76□□□□□ -2.29
SPT2P06843 tT(AGU)O2tT(AGU)O2 73 nt0.76□□□□□ -2.29
SPT2P06843 tV(UAC)QtV(UAC)Q 76 nt0.76□□□□□ -2.29
SPT2P06843 YML100W-AYML100W-A 174 nt0.74□□□□□ -2.29
SPT2P06843 UTP10YJL109C 5310 nt0.72□□□□□ -2.29
SPT2P06843 THO2YNL139C 4794 nt0.68□□□□□ -2.3
SPT2P06843 YOR376W-AYOR376W-A 156 nt0.67□□□□□ -2.3
SPT2P06843 ESP1YGR098C 4893 nt0.67□□□□□ -2.3
SPT2P06843 FMP27YLR454W 7887 nt0.62□□□□□ -2.31
SPT2P06843 SOV1YMR066W 2697 nt0.58□□□□□ -2.32
SPT2P06843 YOR316C-AYOR316C-A 210 nt0.57□□□□□ -2.32
SPT2P06843 snR77snR77 88 nt0.53□□□□□ -2.32
SPT2P06843 PAU9YBL108C-A 129 nt0.52□□□□□ -2.33
SPT2P06843 SBH2YER019C-A 267 nt0.51□□□□□ -2.33
SPT2P06843 snR128snR128 126 nt0.5□□□□□ -2.33
SPT2P06843 snR40snR40 97 nt0.44□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms