Protein–RNA interactions for Protein: P04147

PAB1, Polyadenylate-binding protein, cytoplasmic and nuclear, yeastyeast

Known RBP RIP-Chip data

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PAB1P04147 tM(CAU)Q2tM(CAU)Q2 78 nt0.09□□□□□ -2.4
PAB1P04147 snR45snR45 172 nt0.08□□□□□ -2.4
PAB1P04147 EST1YLR233C 2100 nt0.07□□□□□ -2.4
PAB1P04147 SPG3YDR504C 384 nt0.06□□□□□ -2.4
PAB1P04147 JLP2YMR132C 627 nt0.06□□□□□ -2.4
PAB1P04147 YOR329W-AYOR329W-A 210 nt0.06□□□□□ -2.4
PAB1P04147 YMR046W-AYMR046W-A 129 nt0.05□□□□□ -2.4 RIP-Chip
PAB1P04147 snR39BsnR39B 96 nt0.02□□□□□ -2.41
PAB1P04147 YJL150WYJL150W 303 nt0.01□□□□□ -2.41
PAB1P04147 snR128snR128 126 nt-0.01□□□□□ -2.41
PAB1P04147 snR48snR48 113 nt-0.01□□□□□ -2.41
PAB1P04147 YHL015W-AYHL015W-A 84 nt-0.03□□□□□ -2.41
PAB1P04147 tL(UAA)QtL(UAA)Q 85 nt-0.04□□□□□ -2.42
PAB1P04147 tM(CAU)Q1tM(CAU)Q1 76 nt-0.05□□□□□ -2.42
PAB1P04147 YGR146C-AYGR146C-A 162 nt-0.05□□□□□ -2.42
PAB1P04147 YOR102WYOR102W 351 nt-0.05□□□□□ -2.42
PAB1P04147 TFB5YDR079C-A 219 nt-0.07□□□□□ -2.42 RIP-Chip
PAB1P04147 YJL113WYJL113W 4647 nt-0.08□□□□□ -2.42
PAB1P04147 YDL007C-AYDL007C-A 258 nt-0.09□□□□□ -2.42
PAB1P04147 YGR164WYGR164W 336 nt-0.1□□□□□ -2.43
PAB1P04147 YNL067W-BYNL067W-B 141 nt-0.1□□□□□ -2.43
PAB1P04147 YNL198CYNL198C 303 nt-0.1□□□□□ -2.43
PAB1P04147 YJL077W-AYJL077W-A 87 nt-0.11□□□□□ -2.43
PAB1P04147 snR69snR69 101 nt-0.12□□□□□ -2.43
PAB1P04147 tQ(UUG)QtQ(UUG)Q 76 nt-0.12□□□□□ -2.43
PAB1P04147 PMP2YEL017C-A 132 nt-0.14□□□□□ -2.43 RIP-Chip
PAB1P04147 YBL053WYBL053W 375 nt-0.14□□□□□ -2.43
PAB1P04147 YNL205CYNL205C 423 nt-0.2□□□□□ -2.44
PAB1P04147 YLR466C-BYLR466C-B 117 nt-0.21□□□□□ -2.44
PAB1P04147 RDS3YPR094W 324 nt-0.21□□□□□ -2.44
PAB1P04147 YGR151CYGR151C 336 nt-0.25□□□□□ -2.45 RIP-Chip
PAB1P04147 SEC10YLR166C 2616 nt-0.25□□□□□ -2.45
PAB1P04147 tD(GUC)QtD(GUC)Q 75 nt-0.26□□□□□ -2.45
PAB1P04147 SBH2YER019C-A 267 nt-0.26□□□□□ -2.45 RIP-Chip
PAB1P04147 YHL009W-BYHL009W-B 5409 nt-0.27□□□□□ -2.45
PAB1P04147 YBR178WYBR178W 375 nt-0.28□□□□□ -2.45
PAB1P04147 YER090C-AYER090C-A 90 nt-0.29□□□□□ -2.46
PAB1P04147 YML100W-AYML100W-A 174 nt-0.29□□□□□ -2.46
PAB1P04147 snR50snR50 90 nt-0.29□□□□□ -2.46
PAB1P04147 YNL338WYNL338W 159 nt-0.3□□□□□ -2.46
PAB1P04147 YLR286W-AYLR286W-A 135 nt-0.33□□□□□ -2.46
PAB1P04147 YNL266WYNL266W 420 nt-0.33□□□□□ -2.46
PAB1P04147 URB1YKL014C 5295 nt-0.33□□□□□ -2.46
PAB1P04147 YIL071W-AYIL071W-A 477 nt-0.34□□□□□ -2.46
PAB1P04147 YNL337WYNL337W 255 nt-0.35□□□□□ -2.47
PAB1P04147 YDL159C-BYDL159C-B 177 nt-0.37□□□□□ -2.47
PAB1P04147 SOM1YEL059C-A 225 nt-0.37□□□□□ -2.47 RIP-Chip
PAB1P04147 PAU9YBL108C-A 129 nt-0.38□□□□□ -2.47 RIP-Chip
PAB1P04147 YBR196C-AYBR196C-A 150 nt-0.41□□□□□ -2.48
PAB1P04147 YCR095W-AYCR095W-A 159 nt-0.44□□□□□ -2.48
PAB1P04147 tA(UGC)QtA(UGC)Q 76 nt-0.46□□□□□ -2.48
PAB1P04147 YLR299C-AYLR299C-A 93 nt-0.47□□□□□ -2.48
PAB1P04147 snR67snR67 82 nt-0.48□□□□□ -2.49
PAB1P04147 Q0032Q0032 291 nt-0.5□□□□□ -2.49
PAB1P04147 YGL007C-AYGL007C-A 87 nt-0.52□□□□□ -2.49
PAB1P04147 YCL001W-BYCL001W-B 255 nt-0.53□□□□□ -2.49
PAB1P04147 tT(UGU)G1tT(UGU)G1 72 nt-0.57□□□□□ -2.5
PAB1P04147 tT(UGU)G2tT(UGU)G2 72 nt-0.57□□□□□ -2.5
PAB1P04147 tT(UGU)PtT(UGU)P 72 nt-0.57□□□□□ -2.5
PAB1P04147 YNR077CYNR077C 255 nt-0.58□□□□□ -2.5
PAB1P04147 SKI7YOR076C 2244 nt-0.62□□□□□ -2.51
PAB1P04147 snR161snR161 161 nt-0.64□□□□□ -2.51
PAB1P04147 YML054C-AYML054C-A 159 nt-0.65□□□□□ -2.51
PAB1P04147 YHR180C-BYHR180C-B 105 nt-0.7□□□□□ -2.52
PAB1P04147 YOR225WYOR225W 330 nt-0.71□□□□□ -2.52
PAB1P04147 YBR223W-AYBR223W-A 120 nt-0.72□□□□□ -2.52
PAB1P04147 YLR294CYLR294C 330 nt-0.74□□□□□ -2.53 RIP-Chip
PAB1P04147 snR33snR33 183 nt-0.74□□□□□ -2.53
PAB1P04147 YOL083C-AYOL083C-A 141 nt-0.76□□□□□ -2.53
PAB1P04147 YBL071C-BYBL071C-B 99 nt-0.82□□□□□ -2.54
PAB1P04147 YAL037C-AYAL037C-A 93 nt-0.88□□□□□ -2.55
PAB1P04147 YOL164W-AYOL164W-A 183 nt-0.89□□□□□ -2.55
PAB1P04147 snR81snR81 201 nt-0.92□□□□□ -2.56
PAB1P04147 YBR109W-AYBR109W-A 225 nt-0.93□□□□□ -2.56
PAB1P04147 RPL41AYDL184C 78 nt-0.94□□□□□ -2.56 RIP-Chip
PAB1P04147 YNL170WYNL170W 396 nt-0.95□□□□□ -2.56
PAB1P04147 YBR296C-AYBR296C-A 120 nt-0.96□□□□□ -2.56
PAB1P04147 snR47snR47 99 nt-0.98□□□□□ -2.57
PAB1P04147 YOR376W-AYOR376W-A 156 nt-0.99□□□□□ -2.57
PAB1P04147 YNL103W-AYNL103W-A 90 nt-1.01□□□□□ -2.57
PAB1P04147 YBL100W-CYBL100W-C 120 nt-1.01□□□□□ -2.57
PAB1P04147 YGR240C-AYGR240C-A 201 nt-1.04□□□□□ -2.58
PAB1P04147 YGL041C-BYGL041C-B 183 nt-1.05□□□□□ -2.58
PAB1P04147 YKL106C-AYKL106C-A 120 nt-1.05□□□□□ -2.58 RIP-Chip
PAB1P04147 snR38snR38 95 nt-1.05□□□□□ -2.58
PAB1P04147 ATP8Q0080 147 nt-1.08□□□□□ -2.58
PAB1P04147 snR61snR61 90 nt-1.09□□□□□ -2.58
PAB1P04147 tP(UGG)QtP(UGG)Q 72 nt-1.12□□□□□ -2.59
PAB1P04147 tS(GCU)Q1tS(GCU)Q1 86 nt-1.16□□□□□ -2.6
PAB1P04147 YOR316C-AYOR316C-A 210 nt-1.18□□□□□ -2.6
PAB1P04147 snR77snR77 88 nt-1.19□□□□□ -2.6
PAB1P04147 CDC65tQ(CUG)M 72 nt-1.23□□□□□ -2.61
PAB1P04147 YKL225WYKL225W 348 nt-1.27□□□□□ -2.61
PAB1P04147 YDR034C-AYDR034C-A 177 nt-1.31□□□□□ -2.62
PAB1P04147 Q0092Q0092 141 nt-1.32□□□□□ -2.62
PAB1P04147 snR62snR62 100 nt-1.36□□□□□ -2.63
PAB1P04147 YMR315W-AYMR315W-A 108 nt-1.37□□□□□ -2.63
PAB1P04147 Q0143Q0143 153 nt-1.41□□□□□ -2.64
PAB1P04147 tY(GUA)QtY(GUA)Q 84 nt-1.42□□□□□ -2.64
PAB1P04147 YMR326CYMR326C 309 nt-1.56□□□□□ -2.66
Retrieved 100 of 7,029 protein–RNA pairs in 81.6 ms