Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-PA0A0B7P3V8 NST1YNL091W 3723 nt1.43□□□□□ -2.18
TY4B-PA0A0B7P3V8 YLR149C-AYLR149C-A 87 nt1.43□□□□□ -2.18
TY4B-PA0A0B7P3V8 CAT8YMR280C 4302 nt1.43□□□□□ -2.18
TY4B-PA0A0B7P3V8 YJL077W-AYJL077W-A 87 nt1.42□□□□□ -2.18
TY4B-PA0A0B7P3V8 YKL096C-BYKL096C-B 150 nt1.42□□□□□ -2.18
TY4B-PA0A0B7P3V8 snR38snR38 95 nt1.42□□□□□ -2.18
TY4B-PA0A0B7P3V8 NIP1YMR309C 2439 nt1.42□□□□□ -2.18
TY4B-PA0A0B7P3V8 PAU12YGR294W 363 nt1.41□□□□□ -2.18
TY4B-PA0A0B7P3V8 YLL006W-AYLL006W-A 177 nt1.41□□□□□ -2.18
TY4B-PA0A0B7P3V8 SIP4YJL089W 2490 nt1.41□□□□□ -2.18
TY4B-PA0A0B7P3V8 BUD3YCL014W 4911 nt1.4□□□□□ -2.19
TY4B-PA0A0B7P3V8 BUL2YML111W 2763 nt1.4□□□□□ -2.19
TY4B-PA0A0B7P3V8 LAA1YJL207C 6045 nt1.39□□□□□ -2.19
TY4B-PA0A0B7P3V8 YDL159W-AYDL159W-A 132 nt1.38□□□□□ -2.19
TY4B-PA0A0B7P3V8 SKI7YOR076C 2244 nt1.38□□□□□ -2.19
TY4B-PA0A0B7P3V8 AI1Q0050 2505 nt1.37□□□□□ -2.19
TY4B-PA0A0B7P3V8 YPL060C-AYPL060C-A 3315 nt1.37□□□□□ -2.19
TY4B-PA0A0B7P3V8 YER078W-AYER078W-A 165 nt1.35□□□□□ -2.19
TY4B-PA0A0B7P3V8 tQ(UUG)QtQ(UUG)Q 76 nt1.34□□□□□ -2.19
TY4B-PA0A0B7P3V8 SPT7YBR081C 3999 nt1.34□□□□□ -2.2
TY4B-PA0A0B7P3V8 YGR130CYGR130C 2451 nt1.33□□□□□ -2.2
TY4B-PA0A0B7P3V8 YGR122C-AYGR122C-A 129 nt1.32□□□□□ -2.2
TY4B-PA0A0B7P3V8 snR75snR75 89 nt1.31□□□□□ -2.2
TY4B-PA0A0B7P3V8 YJR029WYJR029W 5268 nt1.28□□□□□ -2.2
TY4B-PA0A0B7P3V8 YPR137C-BYPR137C-B 5268 nt1.28□□□□□ -2.2
TY4B-PA0A0B7P3V8 tH(GUG)E1tH(GUG)E1 72 nt1.25□□□□□ -2.21
TY4B-PA0A0B7P3V8 tH(GUG)E2tH(GUG)E2 72 nt1.25□□□□□ -2.21
TY4B-PA0A0B7P3V8 tH(GUG)G1tH(GUG)G1 72 nt1.25□□□□□ -2.21
TY4B-PA0A0B7P3V8 tH(GUG)G2tH(GUG)G2 72 nt1.25□□□□□ -2.21
TY4B-PA0A0B7P3V8 tH(GUG)HtH(GUG)H 72 nt1.25□□□□□ -2.21
TY4B-PA0A0B7P3V8 tH(GUG)KtH(GUG)K 72 nt1.25□□□□□ -2.21
TY4B-PA0A0B7P3V8 tH(GUG)MtH(GUG)M 72 nt1.25□□□□□ -2.21
TY4B-PA0A0B7P3V8 VAM6YDL077C 3150 nt1.25□□□□□ -2.21
TY4B-PA0A0B7P3V8 tV(UAC)BtV(UAC)B 74 nt1.21□□□□□ -2.22
TY4B-PA0A0B7P3V8 tV(UAC)DtV(UAC)D 74 nt1.21□□□□□ -2.22
TY4B-PA0A0B7P3V8 YER090C-AYER090C-A 90 nt1.2□□□□□ -2.22
TY4B-PA0A0B7P3V8 RKR1YMR247C 4689 nt1.2□□□□□ -2.22
TY4B-PA0A0B7P3V8 IML1YJR138W 4755 nt1.19□□□□□ -2.22
TY4B-PA0A0B7P3V8 MYO1YHR023W 5787 nt1.19□□□□□ -2.22
TY4B-PA0A0B7P3V8 YOR192C-BYOR192C-B 5313 nt1.17□□□□□ -2.22
TY4B-PA0A0B7P3V8 EMT1tM(CAU)D 73 nt1.15□□□□□ -2.23
TY4B-PA0A0B7P3V8 EMT5tM(CAU)J1 73 nt1.15□□□□□ -2.23
TY4B-PA0A0B7P3V8 EMT3tM(CAU)J2 73 nt1.15□□□□□ -2.23
TY4B-PA0A0B7P3V8 EMT4tM(CAU)M 73 nt1.15□□□□□ -2.23
TY4B-PA0A0B7P3V8 EMT2tM(CAU)O2 73 nt1.15□□□□□ -2.23
TY4B-PA0A0B7P3V8 YNL054W-BYNL054W-B 5250 nt1.15□□□□□ -2.23
TY4B-PA0A0B7P3V8 SCC2YDR180W 4482 nt1.12□□□□□ -2.23
TY4B-PA0A0B7P3V8 snR67snR67 82 nt1.1□□□□□ -2.23
TY4B-PA0A0B7P3V8 PET111YMR257C 2403 nt1.08□□□□□ -2.24
TY4B-PA0A0B7P3V8 YPR117WYPR117W 7470 nt1.08□□□□□ -2.24
TY4B-PA0A0B7P3V8 DOP1YDR141C 5097 nt1.08□□□□□ -2.24
TY4B-PA0A0B7P3V8 BEM2YER155C 6504 nt1.06□□□□□ -2.24
TY4B-PA0A0B7P3V8 LTE1YAL024C 4308 nt0.97□□□□□ -2.25
TY4B-PA0A0B7P3V8 PAU24YBR301W 363 nt0.96□□□□□ -2.26
TY4B-PA0A0B7P3V8 YMR160WYMR160W 2451 nt0.93□□□□□ -2.26
TY4B-PA0A0B7P3V8 YKL106C-AYKL106C-A 120 nt0.91□□□□□ -2.26
TY4B-PA0A0B7P3V8 YDL114W-AYDL114W-A 114 nt0.88□□□□□ -2.27
TY4B-PA0A0B7P3V8 YBL100W-BYBL100W-B 5313 nt0.88□□□□□ -2.27
TY4B-PA0A0B7P3V8 MLP2YIL149C 5040 nt0.84□□□□□ -2.27
TY4B-PA0A0B7P3V8 YPR159C-AYPR159C-A 102 nt0.83□□□□□ -2.28
TY4B-PA0A0B7P3V8 MLP1YKR095W 5628 nt0.77□□□□□ -2.29
TY4B-PA0A0B7P3V8 tV(UAC)QtV(UAC)Q 76 nt0.76□□□□□ -2.29
TY4B-PA0A0B7P3V8 YMR272W-AYMR272W-A 114 nt0.76□□□□□ -2.29
TY4B-PA0A0B7P3V8 YOR186C-AYOR186C-A 210 nt0.74□□□□□ -2.29
TY4B-PA0A0B7P3V8 UTP20YBL004W 7482 nt0.74□□□□□ -2.29
TY4B-PA0A0B7P3V8 YML100W-AYML100W-A 174 nt0.71□□□□□ -2.3
TY4B-PA0A0B7P3V8 tF(GAA)BtF(GAA)B 73 nt0.69□□□□□ -2.3
TY4B-PA0A0B7P3V8 tF(GAA)FtF(GAA)F 73 nt0.69□□□□□ -2.3
TY4B-PA0A0B7P3V8 tF(GAA)GtF(GAA)G 73 nt0.69□□□□□ -2.3
TY4B-PA0A0B7P3V8 tF(GAA)H1tF(GAA)H1 73 nt0.69□□□□□ -2.3
TY4B-PA0A0B7P3V8 tF(GAA)H2tF(GAA)H2 73 nt0.69□□□□□ -2.3
TY4B-PA0A0B7P3V8 tF(GAA)MtF(GAA)M 73 nt0.69□□□□□ -2.3
TY4B-PA0A0B7P3V8 tF(GAA)P1tF(GAA)P1 73 nt0.69□□□□□ -2.3
TY4B-PA0A0B7P3V8 tF(GAA)P2tF(GAA)P2 73 nt0.69□□□□□ -2.3
TY4B-PA0A0B7P3V8 YOR376W-AYOR376W-A 156 nt0.67□□□□□ -2.3
TY4B-PA0A0B7P3V8 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
TY4B-PA0A0B7P3V8 tT(AGU)BtT(AGU)B 73 nt0.64□□□□□ -2.31
TY4B-PA0A0B7P3V8 tT(AGU)CtT(AGU)C 73 nt0.64□□□□□ -2.31
TY4B-PA0A0B7P3V8 tT(AGU)DtT(AGU)D 73 nt0.64□□□□□ -2.31
TY4B-PA0A0B7P3V8 tT(AGU)HtT(AGU)H 73 nt0.64□□□□□ -2.31
TY4B-PA0A0B7P3V8 tT(AGU)I1tT(AGU)I1 73 nt0.64□□□□□ -2.31
TY4B-PA0A0B7P3V8 tT(AGU)I2tT(AGU)I2 73 nt0.64□□□□□ -2.31
TY4B-PA0A0B7P3V8 tT(AGU)JtT(AGU)J 73 nt0.64□□□□□ -2.31
TY4B-PA0A0B7P3V8 tT(AGU)N1tT(AGU)N1 73 nt0.64□□□□□ -2.31
TY4B-PA0A0B7P3V8 tT(AGU)N2tT(AGU)N2 73 nt0.64□□□□□ -2.31
TY4B-PA0A0B7P3V8 tT(AGU)O1tT(AGU)O1 73 nt0.64□□□□□ -2.31
TY4B-PA0A0B7P3V8 tT(AGU)O2tT(AGU)O2 73 nt0.64□□□□□ -2.31
TY4B-PA0A0B7P3V8 THO2YNL139C 4794 nt0.64□□□□□ -2.31
TY4B-PA0A0B7P3V8 IQG1YPL242C 4488 nt0.59□□□□□ -2.31
TY4B-PA0A0B7P3V8 YOL014WYOL014W 375 nt0.57□□□□□ -2.32
TY4B-PA0A0B7P3V8 YOR316C-AYOR316C-A 210 nt0.57□□□□□ -2.32
TY4B-PA0A0B7P3V8 SOV1YMR066W 2697 nt0.54□□□□□ -2.32
TY4B-PA0A0B7P3V8 snR77snR77 88 nt0.54□□□□□ -2.32
TY4B-PA0A0B7P3V8 YKL145W-AYKL145W-A 93 nt0.54□□□□□ -2.32
TY4B-PA0A0B7P3V8 SBH2YER019C-A 267 nt0.51□□□□□ -2.33
TY4B-PA0A0B7P3V8 snR40snR40 97 nt0.5□□□□□ -2.33
TY4B-PA0A0B7P3V8 PAU9YBL108C-A 129 nt0.46□□□□□ -2.34
TY4B-PA0A0B7P3V8 FMP27YLR454W 7887 nt0.46□□□□□ -2.34
TY4B-PA0A0B7P3V8 snR128snR128 126 nt0.44□□□□□ -2.34
TY4B-PA0A0B7P3V8 ESP1YGR098C 4893 nt0.38□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 50.4 ms