Protein–RNA interactions for Protein: Q9CQX0

Otub2, Ubiquitin thioesterase OTUB2, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub2Q9CQX0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Otub2Q9CQX0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Otub2Q9CQX0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Otub2Q9CQX0 Gm30023-201ENSMUST00000197970 889 ntBASIC23.4■■□□□ 1.34
Otub2Q9CQX0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Otub2Q9CQX0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Otub2Q9CQX0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Otub2Q9CQX0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Otub2Q9CQX0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Otub2Q9CQX0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.37■■□□□ 1.33
Otub2Q9CQX0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Otub2Q9CQX0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Otub2Q9CQX0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Otub2Q9CQX0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Otub2Q9CQX0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Otub2Q9CQX0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Otub2Q9CQX0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.34■■□□□ 1.33
Otub2Q9CQX0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Otub2Q9CQX0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Otub2Q9CQX0 Particl-201ENSMUST00000205370 1560 ntBASIC23.32■■□□□ 1.32
Otub2Q9CQX0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Otub2Q9CQX0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Otub2Q9CQX0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.31■■□□□ 1.32
Otub2Q9CQX0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.3■■□□□ 1.32
Otub2Q9CQX0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Otub2Q9CQX0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Otub2Q9CQX0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Otub2Q9CQX0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Otub2Q9CQX0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Otub2Q9CQX0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.26■■□□□ 1.31
Otub2Q9CQX0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Otub2Q9CQX0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Otub2Q9CQX0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Otub2Q9CQX0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.24■■□□□ 1.31
Otub2Q9CQX0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Otub2Q9CQX0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Otub2Q9CQX0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Otub2Q9CQX0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Otub2Q9CQX0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.23■■□□□ 1.31
Otub2Q9CQX0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.23■■□□□ 1.31
Otub2Q9CQX0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Otub2Q9CQX0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Otub2Q9CQX0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Otub2Q9CQX0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.21■■□□□ 1.31
Otub2Q9CQX0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.2■■□□□ 1.3
Otub2Q9CQX0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Otub2Q9CQX0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.2■■□□□ 1.3
Otub2Q9CQX0 Zxda-201ENSMUST00000117281 2621 ntBASIC23.2■■□□□ 1.3
Otub2Q9CQX0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.19■■□□□ 1.3
Otub2Q9CQX0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Otub2Q9CQX0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Otub2Q9CQX0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Otub2Q9CQX0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Otub2Q9CQX0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Otub2Q9CQX0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Otub2Q9CQX0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Otub2Q9CQX0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Otub2Q9CQX0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Otub2Q9CQX0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Otub2Q9CQX0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Otub2Q9CQX0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Otub2Q9CQX0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Otub2Q9CQX0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.13■■□□□ 1.29
Otub2Q9CQX0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Otub2Q9CQX0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.12■■□□□ 1.29
Otub2Q9CQX0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Otub2Q9CQX0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.12■■□□□ 1.29
Otub2Q9CQX0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Otub2Q9CQX0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Otub2Q9CQX0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Otub2Q9CQX0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Otub2Q9CQX0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Otub2Q9CQX0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Otub2Q9CQX0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Otub2Q9CQX0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Otub2Q9CQX0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Otub2Q9CQX0 Mir6538-201ENSMUST00000183713 110 ntBASIC23.07■■□□□ 1.28
Otub2Q9CQX0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Otub2Q9CQX0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.05■■□□□ 1.28
Otub2Q9CQX0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Otub2Q9CQX0 Gm6311-201ENSMUST00000073790 878 ntBASIC23.05■■□□□ 1.28
Otub2Q9CQX0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Otub2Q9CQX0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Otub2Q9CQX0 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.03■■□□□ 1.28
Otub2Q9CQX0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Otub2Q9CQX0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Otub2Q9CQX0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Otub2Q9CQX0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.03■■□□□ 1.28
Otub2Q9CQX0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.02■■□□□ 1.28
Otub2Q9CQX0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Otub2Q9CQX0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Otub2Q9CQX0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Otub2Q9CQX0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23■■□□□ 1.27
Otub2Q9CQX0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Otub2Q9CQX0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23■■□□□ 1.27
Otub2Q9CQX0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23■■□□□ 1.27
Otub2Q9CQX0 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.99■■□□□ 1.27
Otub2Q9CQX0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.99■■□□□ 1.27
Otub2Q9CQX0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
Otub2Q9CQX0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms