Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Lsm7Q9CQQ8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Lsm7Q9CQQ8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.34■■□□□ 1.49
Lsm7Q9CQQ8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.34■■□□□ 1.49
Lsm7Q9CQQ8 Gm30023-201ENSMUST00000197970 889 ntBASIC24.34■■□□□ 1.49
Lsm7Q9CQQ8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Lsm7Q9CQQ8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Lsm7Q9CQQ8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Lsm7Q9CQQ8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Lsm7Q9CQQ8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Lsm7Q9CQQ8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.32■■□□□ 1.48
Lsm7Q9CQQ8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.31■■□□□ 1.48
Lsm7Q9CQQ8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lsm7Q9CQQ8 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.31■■□□□ 1.48
Lsm7Q9CQQ8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Lsm7Q9CQQ8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.3■■□□□ 1.48
Lsm7Q9CQQ8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lsm7Q9CQQ8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.29■■□□□ 1.48
Lsm7Q9CQQ8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Lsm7Q9CQQ8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lsm7Q9CQQ8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lsm7Q9CQQ8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lsm7Q9CQQ8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lsm7Q9CQQ8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Lsm7Q9CQQ8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.28■■□□□ 1.48
Lsm7Q9CQQ8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Lsm7Q9CQQ8 Gm11599-201ENSMUST00000118720 878 ntBASIC24.27■■□□□ 1.48
Lsm7Q9CQQ8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Lsm7Q9CQQ8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Lsm7Q9CQQ8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Lsm7Q9CQQ8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Lsm7Q9CQQ8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Lsm7Q9CQQ8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Lsm7Q9CQQ8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Lsm7Q9CQQ8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Lsm7Q9CQQ8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Lsm7Q9CQQ8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Lsm7Q9CQQ8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.24■■□□□ 1.47
Lsm7Q9CQQ8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Lsm7Q9CQQ8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Lsm7Q9CQQ8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Lsm7Q9CQQ8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
Lsm7Q9CQQ8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
Lsm7Q9CQQ8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Lsm7Q9CQQ8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Lsm7Q9CQQ8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Lsm7Q9CQQ8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Lsm7Q9CQQ8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.19■■□□□ 1.46
Lsm7Q9CQQ8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Lsm7Q9CQQ8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.18■■□□□ 1.46
Lsm7Q9CQQ8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.16■■□□□ 1.46
Lsm7Q9CQQ8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Lsm7Q9CQQ8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
Lsm7Q9CQQ8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Lsm7Q9CQQ8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Lsm7Q9CQQ8 Particl-201ENSMUST00000205370 1560 ntBASIC24.15■■□□□ 1.46
Lsm7Q9CQQ8 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.14■■□□□ 1.46
Lsm7Q9CQQ8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Lsm7Q9CQQ8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Lsm7Q9CQQ8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Lsm7Q9CQQ8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Lsm7Q9CQQ8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Lsm7Q9CQQ8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Lsm7Q9CQQ8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.13■■□□□ 1.45
Lsm7Q9CQQ8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Lsm7Q9CQQ8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Lsm7Q9CQQ8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Lsm7Q9CQQ8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Lsm7Q9CQQ8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Lsm7Q9CQQ8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
Lsm7Q9CQQ8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Lsm7Q9CQQ8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Lsm7Q9CQQ8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.09■■□□□ 1.45
Lsm7Q9CQQ8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Lsm7Q9CQQ8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.08■■□□□ 1.45
Lsm7Q9CQQ8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Lsm7Q9CQQ8 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.08■■□□□ 1.44
Lsm7Q9CQQ8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.07■■□□□ 1.44
Lsm7Q9CQQ8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.05■■□□□ 1.44
Lsm7Q9CQQ8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Lsm7Q9CQQ8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Lsm7Q9CQQ8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.04■■□□□ 1.44
Lsm7Q9CQQ8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Lsm7Q9CQQ8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Lsm7Q9CQQ8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
Lsm7Q9CQQ8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Lsm7Q9CQQ8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.01■■□□□ 1.43
Lsm7Q9CQQ8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Lsm7Q9CQQ8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Lsm7Q9CQQ8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Lsm7Q9CQQ8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Lsm7Q9CQQ8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24■■□□□ 1.43
Lsm7Q9CQQ8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Lsm7Q9CQQ8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Lsm7Q9CQQ8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Lsm7Q9CQQ8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.99■■□□□ 1.43
Lsm7Q9CQQ8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Lsm7Q9CQQ8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
Lsm7Q9CQQ8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.97■■□□□ 1.43
Lsm7Q9CQQ8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms