Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gm25239-201ENSMUST00000174915 86 ntBASIC38.69■■■■□ 3.78
Lsm7Q9CQQ8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
Lsm7Q9CQQ8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Lsm7Q9CQQ8 Gm15042-201ENSMUST00000120212 883 ntBASIC33.98■■■■□ 3.03
Lsm7Q9CQQ8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Lsm7Q9CQQ8 Gm24109-201ENSMUST00000175489 103 ntBASIC33.41■■■□□ 2.94
Lsm7Q9CQQ8 Gm15045-201ENSMUST00000117359 883 ntBASIC33.19■■■□□ 2.9
Lsm7Q9CQQ8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Lsm7Q9CQQ8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Lsm7Q9CQQ8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.68■■■□□ 2.82
Lsm7Q9CQQ8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Lsm7Q9CQQ8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Lsm7Q9CQQ8 Gm23366-201ENSMUST00000175022 89 ntBASIC32.39■■■□□ 2.78
Lsm7Q9CQQ8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Lsm7Q9CQQ8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Lsm7Q9CQQ8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Lsm7Q9CQQ8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.62■■■□□ 2.65
Lsm7Q9CQQ8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Lsm7Q9CQQ8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Lsm7Q9CQQ8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Lsm7Q9CQQ8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Lsm7Q9CQQ8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.16■■■□□ 2.58
Lsm7Q9CQQ8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
Lsm7Q9CQQ8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Lsm7Q9CQQ8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Lsm7Q9CQQ8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Lsm7Q9CQQ8 Psd-208ENSMUST00000224556 2034 ntBASIC31.05■■■□□ 2.56
Lsm7Q9CQQ8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.94■■■□□ 2.54
Lsm7Q9CQQ8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.92■■■□□ 2.54
Lsm7Q9CQQ8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.84■■■□□ 2.53
Lsm7Q9CQQ8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Lsm7Q9CQQ8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Lsm7Q9CQQ8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Lsm7Q9CQQ8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Lsm7Q9CQQ8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.53■■■□□ 2.48
Lsm7Q9CQQ8 Gm25238-201ENSMUST00000174914 89 ntBASIC30.45■■■□□ 2.47
Lsm7Q9CQQ8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.44■■■□□ 2.46
Lsm7Q9CQQ8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Lsm7Q9CQQ8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Lsm7Q9CQQ8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Lsm7Q9CQQ8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Lsm7Q9CQQ8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Lsm7Q9CQQ8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
Lsm7Q9CQQ8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.93■■■□□ 2.38
Lsm7Q9CQQ8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.88■■■□□ 2.37
Lsm7Q9CQQ8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Lsm7Q9CQQ8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Lsm7Q9CQQ8 Gm27325-201ENSMUST00000175467 74 ntBASIC29.77■■■□□ 2.36
Lsm7Q9CQQ8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Lsm7Q9CQQ8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Lsm7Q9CQQ8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Lsm7Q9CQQ8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.62■■■□□ 2.33
Lsm7Q9CQQ8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.57■■■□□ 2.32
Lsm7Q9CQQ8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.52■■■□□ 2.32
Lsm7Q9CQQ8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
Lsm7Q9CQQ8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.45■■■□□ 2.31
Lsm7Q9CQQ8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Lsm7Q9CQQ8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Lsm7Q9CQQ8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Lsm7Q9CQQ8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Lsm7Q9CQQ8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.21■■■□□ 2.27
Lsm7Q9CQQ8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Lsm7Q9CQQ8 Gm25262-201ENSMUST00000174934 133 ntBASIC29.19■■■□□ 2.26
Lsm7Q9CQQ8 Rab21-202ENSMUST00000218831 843 ntBASIC29.18■■■□□ 2.26
Lsm7Q9CQQ8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Lsm7Q9CQQ8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Lsm7Q9CQQ8 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.15■■■□□ 2.26
Lsm7Q9CQQ8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Lsm7Q9CQQ8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Lsm7Q9CQQ8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
Lsm7Q9CQQ8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.09■■■□□ 2.25
Lsm7Q9CQQ8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Lsm7Q9CQQ8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
Lsm7Q9CQQ8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Lsm7Q9CQQ8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Lsm7Q9CQQ8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.95■■■□□ 2.23
Lsm7Q9CQQ8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Lsm7Q9CQQ8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Lsm7Q9CQQ8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.81■■■□□ 2.2
Lsm7Q9CQQ8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Lsm7Q9CQQ8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Lsm7Q9CQQ8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Lsm7Q9CQQ8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.71■■■□□ 2.19
Lsm7Q9CQQ8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Lsm7Q9CQQ8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Lsm7Q9CQQ8 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.68■■■□□ 2.18
Lsm7Q9CQQ8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.67■■■□□ 2.18
Lsm7Q9CQQ8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.61■■■□□ 2.17
Lsm7Q9CQQ8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.59■■■□□ 2.17
Lsm7Q9CQQ8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Lsm7Q9CQQ8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Lsm7Q9CQQ8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Lsm7Q9CQQ8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
Lsm7Q9CQQ8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Lsm7Q9CQQ8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Lsm7Q9CQQ8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Lsm7Q9CQQ8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.47■■■□□ 2.15
Lsm7Q9CQQ8 Gm26115-201ENSMUST00000175605 87 ntBASIC28.41■■■□□ 2.14
Lsm7Q9CQQ8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Lsm7Q9CQQ8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.36■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms