Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pcdhb5Q91XZ5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pcdhb5Q91XZ5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
Pcdhb5Q91XZ5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Pcdhb5Q91XZ5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pcdhb5Q91XZ5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Pcdhb5Q91XZ5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pcdhb5Q91XZ5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pcdhb5Q91XZ5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.72■■■□□ 2.19
Pcdhb5Q91XZ5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Pcdhb5Q91XZ5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pcdhb5Q91XZ5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pcdhb5Q91XZ5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Pcdhb5Q91XZ5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pcdhb5Q91XZ5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Pcdhb5Q91XZ5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Pcdhb5Q91XZ5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.69■■■□□ 2.18
Pcdhb5Q91XZ5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdhb5Q91XZ5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Pcdhb5Q91XZ5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pcdhb5Q91XZ5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pcdhb5Q91XZ5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
Pcdhb5Q91XZ5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pcdhb5Q91XZ5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pcdhb5Q91XZ5 Particl-201ENSMUST00000205370 1560 ntBASIC28.67■■■□□ 2.18
Pcdhb5Q91XZ5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Pcdhb5Q91XZ5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Pcdhb5Q91XZ5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Pcdhb5Q91XZ5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
Pcdhb5Q91XZ5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Pcdhb5Q91XZ5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Pcdhb5Q91XZ5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.64■■■□□ 2.18
Pcdhb5Q91XZ5 Gm11175-201ENSMUST00000116172 543 ntBASIC28.63■■■□□ 2.17
Pcdhb5Q91XZ5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Pcdhb5Q91XZ5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Pcdhb5Q91XZ5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Pcdhb5Q91XZ5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
Pcdhb5Q91XZ5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Pcdhb5Q91XZ5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.6■■■□□ 2.17
Pcdhb5Q91XZ5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Pcdhb5Q91XZ5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
Pcdhb5Q91XZ5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
Pcdhb5Q91XZ5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Pcdhb5Q91XZ5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Pcdhb5Q91XZ5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.58■■■□□ 2.17
Pcdhb5Q91XZ5 Mir6538-201ENSMUST00000183713 110 ntBASIC28.58■■■□□ 2.17
Pcdhb5Q91XZ5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Pcdhb5Q91XZ5 Gm6311-201ENSMUST00000073790 878 ntBASIC28.58■■■□□ 2.17
Pcdhb5Q91XZ5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Pcdhb5Q91XZ5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Pcdhb5Q91XZ5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Pcdhb5Q91XZ5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Pcdhb5Q91XZ5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Pcdhb5Q91XZ5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Pcdhb5Q91XZ5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Pcdhb5Q91XZ5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
Pcdhb5Q91XZ5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.16
Pcdhb5Q91XZ5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Pcdhb5Q91XZ5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.51■■■□□ 2.15
Pcdhb5Q91XZ5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
Pcdhb5Q91XZ5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
Pcdhb5Q91XZ5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.49■■■□□ 2.15
Pcdhb5Q91XZ5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.49■■■□□ 2.15
Pcdhb5Q91XZ5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Pcdhb5Q91XZ5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Pcdhb5Q91XZ5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Pcdhb5Q91XZ5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.46■■■□□ 2.15
Pcdhb5Q91XZ5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Pcdhb5Q91XZ5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.44■■■□□ 2.14
Pcdhb5Q91XZ5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pcdhb5Q91XZ5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pcdhb5Q91XZ5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pcdhb5Q91XZ5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
Pcdhb5Q91XZ5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.41■■■□□ 2.14
Pcdhb5Q91XZ5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pcdhb5Q91XZ5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
Pcdhb5Q91XZ5 Zxda-201ENSMUST00000117281 2621 ntBASIC28.4■■■□□ 2.14
Pcdhb5Q91XZ5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Pcdhb5Q91XZ5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Pcdhb5Q91XZ5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pcdhb5Q91XZ5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pcdhb5Q91XZ5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
Pcdhb5Q91XZ5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pcdhb5Q91XZ5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Pcdhb5Q91XZ5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pcdhb5Q91XZ5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.35■■■□□ 2.13
Pcdhb5Q91XZ5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Pcdhb5Q91XZ5 Cap2-205ENSMUST00000225824 1634 ntBASIC28.32■■■□□ 2.12
Pcdhb5Q91XZ5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.32■■■□□ 2.12
Pcdhb5Q91XZ5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Pcdhb5Q91XZ5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Pcdhb5Q91XZ5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Pcdhb5Q91XZ5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.31■■■□□ 2.12
Pcdhb5Q91XZ5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Pcdhb5Q91XZ5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Pcdhb5Q91XZ5 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Pcdhb5Q91XZ5 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.29■■■□□ 2.12
Pcdhb5Q91XZ5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.27■■■□□ 2.12
Pcdhb5Q91XZ5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pcdhb5Q91XZ5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms