Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.36■■□□□ 1.17
Pcdhgb2Q91XX7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb2Q91XX7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhgb2Q91XX7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Pcdhgb2Q91XX7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb2Q91XX7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb2Q91XX7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb2Q91XX7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb2Q91XX7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb2Q91XX7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhgb2Q91XX7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgb2Q91XX7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhgb2Q91XX7 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdhgb2Q91XX7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhgb2Q91XX7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.32■■□□□ 1.16
Pcdhgb2Q91XX7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhgb2Q91XX7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhgb2Q91XX7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb2Q91XX7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdhgb2Q91XX7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb2Q91XX7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb2Q91XX7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhgb2Q91XX7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb2Q91XX7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhgb2Q91XX7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhgb2Q91XX7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Pcdhgb2Q91XX7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Pcdhgb2Q91XX7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pcdhgb2Q91XX7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Pcdhgb2Q91XX7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.26■■□□□ 1.15
Pcdhgb2Q91XX7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhgb2Q91XX7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb2Q91XX7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Pcdhgb2Q91XX7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhgb2Q91XX7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Pcdhgb2Q91XX7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Pcdhgb2Q91XX7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgb2Q91XX7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgb2Q91XX7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Pcdhgb2Q91XX7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgb2Q91XX7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhgb2Q91XX7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgb2Q91XX7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Pcdhgb2Q91XX7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhgb2Q91XX7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb2Q91XX7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb2Q91XX7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
Pcdhgb2Q91XX7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb2Q91XX7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhgb2Q91XX7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb2Q91XX7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb2Q91XX7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb2Q91XX7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhgb2Q91XX7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb2Q91XX7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb2Q91XX7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.17■■□□□ 1.14
Pcdhgb2Q91XX7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb2Q91XX7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb2Q91XX7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb2Q91XX7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhgb2Q91XX7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhgb2Q91XX7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.15■■□□□ 1.14
Pcdhgb2Q91XX7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb2Q91XX7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhgb2Q91XX7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb2Q91XX7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb2Q91XX7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb2Q91XX7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb2Q91XX7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb2Q91XX7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb2Q91XX7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhgb2Q91XX7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Pcdhgb2Q91XX7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhgb2Q91XX7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgb2Q91XX7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhgb2Q91XX7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhgb2Q91XX7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgb2Q91XX7 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgb2Q91XX7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgb2Q91XX7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhgb2Q91XX7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhgb2Q91XX7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgb2Q91XX7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Pcdhgb2Q91XX7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgb2Q91XX7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgb2Q91XX7 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgb2Q91XX7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgb2Q91XX7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgb2Q91XX7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgb2Q91XX7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhgb2Q91XX7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb2Q91XX7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb2Q91XX7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb2Q91XX7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb2Q91XX7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhgb2Q91XX7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
Pcdhgb2Q91XX7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Pcdhgb2Q91XX7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdhgb2Q91XX7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.05■■□□□ 1.12
Pcdhgb2Q91XX7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms