Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Trex1Q91XB0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Trex1Q91XB0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.06■■■□□ 2.08
Trex1Q91XB0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Trex1Q91XB0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.05■■■□□ 2.08
Trex1Q91XB0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Trex1Q91XB0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Trex1Q91XB0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Trex1Q91XB0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Trex1Q91XB0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Trex1Q91XB0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Trex1Q91XB0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Trex1Q91XB0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.02■■■□□ 2.08
Trex1Q91XB0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Trex1Q91XB0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Trex1Q91XB0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28■■■□□ 2.07
Trex1Q91XB0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Trex1Q91XB0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Trex1Q91XB0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.99■■■□□ 2.07
Trex1Q91XB0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Trex1Q91XB0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Trex1Q91XB0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Trex1Q91XB0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Trex1Q91XB0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Trex1Q91XB0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Trex1Q91XB0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
Trex1Q91XB0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
Trex1Q91XB0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.95■■■□□ 2.06
Trex1Q91XB0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trex1Q91XB0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trex1Q91XB0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trex1Q91XB0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.93■■■□□ 2.06
Trex1Q91XB0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Trex1Q91XB0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
Trex1Q91XB0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
Trex1Q91XB0 Gm11175-201ENSMUST00000116172 543 ntBASIC27.91■■■□□ 2.06
Trex1Q91XB0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.91■■■□□ 2.06
Trex1Q91XB0 Particl-201ENSMUST00000205370 1560 ntBASIC27.9■■■□□ 2.06
Trex1Q91XB0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.9■■■□□ 2.06
Trex1Q91XB0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
Trex1Q91XB0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
Trex1Q91XB0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Trex1Q91XB0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
Trex1Q91XB0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Trex1Q91XB0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
Trex1Q91XB0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Trex1Q91XB0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Trex1Q91XB0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Trex1Q91XB0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Trex1Q91XB0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.84■■■□□ 2.05
Trex1Q91XB0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Trex1Q91XB0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Trex1Q91XB0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
Trex1Q91XB0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
Trex1Q91XB0 Zxda-201ENSMUST00000117281 2621 ntBASIC27.82■■■□□ 2.04
Trex1Q91XB0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Trex1Q91XB0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.81■■■□□ 2.04
Trex1Q91XB0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Trex1Q91XB0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Trex1Q91XB0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Trex1Q91XB0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trex1Q91XB0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
Trex1Q91XB0 Mir6538-201ENSMUST00000183713 110 ntBASIC27.77■■■□□ 2.04
Trex1Q91XB0 Gm6311-201ENSMUST00000073790 878 ntBASIC27.77■■■□□ 2.04
Trex1Q91XB0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trex1Q91XB0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trex1Q91XB0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Trex1Q91XB0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Trex1Q91XB0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Trex1Q91XB0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Trex1Q91XB0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
Trex1Q91XB0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Trex1Q91XB0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Trex1Q91XB0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.72■■■□□ 2.03
Trex1Q91XB0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.71■■■□□ 2.03
Trex1Q91XB0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.71■■■□□ 2.03
Trex1Q91XB0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Trex1Q91XB0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.69■■■□□ 2.02
Trex1Q91XB0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.68■■■□□ 2.02
Trex1Q91XB0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Trex1Q91XB0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
Trex1Q91XB0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Trex1Q91XB0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Trex1Q91XB0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
Trex1Q91XB0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Trex1Q91XB0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Trex1Q91XB0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.65■■■□□ 2.02
Trex1Q91XB0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.64■■■□□ 2.02
Trex1Q91XB0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Trex1Q91XB0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Trex1Q91XB0 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.61■■■□□ 2.01
Trex1Q91XB0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.61■■■□□ 2.01
Trex1Q91XB0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
Trex1Q91XB0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Trex1Q91XB0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.59■■■□□ 2.01
Trex1Q91XB0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Trex1Q91XB0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Trex1Q91XB0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Trex1Q91XB0 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.57■■■□□ 2
Trex1Q91XB0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.57■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms