Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Cdhr1Q8VHP6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Cdhr1Q8VHP6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Cdhr1Q8VHP6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.5■■□□□ 1.35
Cdhr1Q8VHP6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Cdhr1Q8VHP6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Cdhr1Q8VHP6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Cdhr1Q8VHP6 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.49■■□□□ 1.35
Cdhr1Q8VHP6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Cdhr1Q8VHP6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cdhr1Q8VHP6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Cdhr1Q8VHP6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Cdhr1Q8VHP6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Cdhr1Q8VHP6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cdhr1Q8VHP6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Cdhr1Q8VHP6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Cdhr1Q8VHP6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cdhr1Q8VHP6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Cdhr1Q8VHP6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cdhr1Q8VHP6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Cdhr1Q8VHP6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Cdhr1Q8VHP6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.42■■□□□ 1.34
Cdhr1Q8VHP6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.41■■□□□ 1.34
Cdhr1Q8VHP6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Cdhr1Q8VHP6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Cdhr1Q8VHP6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.39■■□□□ 1.33
Cdhr1Q8VHP6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.39■■□□□ 1.33
Cdhr1Q8VHP6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Cdhr1Q8VHP6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.38■■□□□ 1.33
Cdhr1Q8VHP6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cdhr1Q8VHP6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Cdhr1Q8VHP6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cdhr1Q8VHP6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cdhr1Q8VHP6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Cdhr1Q8VHP6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.37■■□□□ 1.33
Cdhr1Q8VHP6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Cdhr1Q8VHP6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.36■■□□□ 1.33
Cdhr1Q8VHP6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Cdhr1Q8VHP6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cdhr1Q8VHP6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Cdhr1Q8VHP6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cdhr1Q8VHP6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Cdhr1Q8VHP6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cdhr1Q8VHP6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cdhr1Q8VHP6 Particl-201ENSMUST00000205370 1560 ntBASIC23.33■■□□□ 1.33
Cdhr1Q8VHP6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cdhr1Q8VHP6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.32■■□□□ 1.32
Cdhr1Q8VHP6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cdhr1Q8VHP6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cdhr1Q8VHP6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cdhr1Q8VHP6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Cdhr1Q8VHP6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdhr1Q8VHP6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Cdhr1Q8VHP6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.29■■□□□ 1.32
Cdhr1Q8VHP6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cdhr1Q8VHP6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Cdhr1Q8VHP6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cdhr1Q8VHP6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cdhr1Q8VHP6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Cdhr1Q8VHP6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cdhr1Q8VHP6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Cdhr1Q8VHP6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cdhr1Q8VHP6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cdhr1Q8VHP6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.23■■□□□ 1.31
Cdhr1Q8VHP6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cdhr1Q8VHP6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Cdhr1Q8VHP6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Cdhr1Q8VHP6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Cdhr1Q8VHP6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Cdhr1Q8VHP6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Cdhr1Q8VHP6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdhr1Q8VHP6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cdhr1Q8VHP6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdhr1Q8VHP6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cdhr1Q8VHP6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Cdhr1Q8VHP6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdhr1Q8VHP6 Gm11175-201ENSMUST00000116172 543 ntBASIC23.19■■□□□ 1.3
Cdhr1Q8VHP6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.19■■□□□ 1.3
Cdhr1Q8VHP6 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.19■■□□□ 1.3
Cdhr1Q8VHP6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cdhr1Q8VHP6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Cdhr1Q8VHP6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.18■■□□□ 1.3
Cdhr1Q8VHP6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.18■■□□□ 1.3
Cdhr1Q8VHP6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cdhr1Q8VHP6 Gm6311-201ENSMUST00000073790 878 ntBASIC23.18■■□□□ 1.3
Cdhr1Q8VHP6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cdhr1Q8VHP6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdhr1Q8VHP6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cdhr1Q8VHP6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.15■■□□□ 1.3
Cdhr1Q8VHP6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cdhr1Q8VHP6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Cdhr1Q8VHP6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cdhr1Q8VHP6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cdhr1Q8VHP6 Mir6538-201ENSMUST00000183713 110 ntBASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms