Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nkd2Q8VE28 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nkd2Q8VE28 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Nkd2Q8VE28 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.6■■□□□ 1.05
Nkd2Q8VE28 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Nkd2Q8VE28 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nkd2Q8VE28 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.59■■□□□ 1.05
Nkd2Q8VE28 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Nkd2Q8VE28 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nkd2Q8VE28 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nkd2Q8VE28 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nkd2Q8VE28 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nkd2Q8VE28 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.58■■□□□ 1.05
Nkd2Q8VE28 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Nkd2Q8VE28 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.58■■□□□ 1.05
Nkd2Q8VE28 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkd2Q8VE28 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Nkd2Q8VE28 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Nkd2Q8VE28 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Nkd2Q8VE28 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.56■■□□□ 1.04
Nkd2Q8VE28 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkd2Q8VE28 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkd2Q8VE28 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Nkd2Q8VE28 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Nkd2Q8VE28 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Nkd2Q8VE28 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Nkd2Q8VE28 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nkd2Q8VE28 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nkd2Q8VE28 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nkd2Q8VE28 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nkd2Q8VE28 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkd2Q8VE28 Gm7432-201ENSMUST00000210343 879 ntBASIC21.54■■□□□ 1.04
Nkd2Q8VE28 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nkd2Q8VE28 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Nkd2Q8VE28 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkd2Q8VE28 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nkd2Q8VE28 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkd2Q8VE28 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nkd2Q8VE28 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.53■■□□□ 1.04
Nkd2Q8VE28 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nkd2Q8VE28 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nkd2Q8VE28 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nkd2Q8VE28 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkd2Q8VE28 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkd2Q8VE28 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Nkd2Q8VE28 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nkd2Q8VE28 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Nkd2Q8VE28 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nkd2Q8VE28 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nkd2Q8VE28 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nkd2Q8VE28 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nkd2Q8VE28 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.48■■□□□ 1.03
Nkd2Q8VE28 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Nkd2Q8VE28 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Nkd2Q8VE28 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Nkd2Q8VE28 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nkd2Q8VE28 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Nkd2Q8VE28 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Nkd2Q8VE28 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
Nkd2Q8VE28 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Nkd2Q8VE28 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Nkd2Q8VE28 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Nkd2Q8VE28 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.43■■□□□ 1.02
Nkd2Q8VE28 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Nkd2Q8VE28 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Nkd2Q8VE28 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Nkd2Q8VE28 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
Nkd2Q8VE28 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nkd2Q8VE28 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.41■■□□□ 1.02
Nkd2Q8VE28 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Nkd2Q8VE28 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.41■■□□□ 1.02
Nkd2Q8VE28 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkd2Q8VE28 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Nkd2Q8VE28 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nkd2Q8VE28 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nkd2Q8VE28 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nkd2Q8VE28 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.38■■□□□ 1.01
Nkd2Q8VE28 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nkd2Q8VE28 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Nkd2Q8VE28 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nkd2Q8VE28 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Nkd2Q8VE28 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nkd2Q8VE28 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nkd2Q8VE28 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Nkd2Q8VE28 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nkd2Q8VE28 Gm11599-201ENSMUST00000118720 878 ntBASIC21.36■■□□□ 1.01
Nkd2Q8VE28 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nkd2Q8VE28 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nkd2Q8VE28 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nkd2Q8VE28 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Nkd2Q8VE28 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.35■■□□□ 1.01
Nkd2Q8VE28 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nkd2Q8VE28 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nkd2Q8VE28 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.34■■□□□ 1.01
Nkd2Q8VE28 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nkd2Q8VE28 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nkd2Q8VE28 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nkd2Q8VE28 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nkd2Q8VE28 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nkd2Q8VE28 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms