Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Zcchc9Q8R1J3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Zcchc9Q8R1J3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Zcchc9Q8R1J3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Zcchc9Q8R1J3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Zcchc9Q8R1J3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Zcchc9Q8R1J3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.82■■□□□ 1.4
Zcchc9Q8R1J3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.82■■□□□ 1.4
Zcchc9Q8R1J3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Zcchc9Q8R1J3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Zcchc9Q8R1J3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Zcchc9Q8R1J3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.8■■□□□ 1.4
Zcchc9Q8R1J3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Zcchc9Q8R1J3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.79■■□□□ 1.4
Zcchc9Q8R1J3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Zcchc9Q8R1J3 Gm11175-201ENSMUST00000116172 543 ntBASIC23.78■■□□□ 1.4
Zcchc9Q8R1J3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Zcchc9Q8R1J3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
Zcchc9Q8R1J3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.77■■□□□ 1.4
Zcchc9Q8R1J3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Zcchc9Q8R1J3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Zcchc9Q8R1J3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Zcchc9Q8R1J3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Zcchc9Q8R1J3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Zcchc9Q8R1J3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Zcchc9Q8R1J3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Zcchc9Q8R1J3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Zcchc9Q8R1J3 Mir6538-201ENSMUST00000183713 110 ntBASIC23.75■■□□□ 1.39
Zcchc9Q8R1J3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Zcchc9Q8R1J3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Zcchc9Q8R1J3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Zcchc9Q8R1J3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Zcchc9Q8R1J3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Zcchc9Q8R1J3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Zcchc9Q8R1J3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Zcchc9Q8R1J3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Zcchc9Q8R1J3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.73■■□□□ 1.39
Zcchc9Q8R1J3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Zcchc9Q8R1J3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Zcchc9Q8R1J3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Zcchc9Q8R1J3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Zcchc9Q8R1J3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Zcchc9Q8R1J3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Zcchc9Q8R1J3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Zcchc9Q8R1J3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Zcchc9Q8R1J3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Zcchc9Q8R1J3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Zcchc9Q8R1J3 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.68■■□□□ 1.38
Zcchc9Q8R1J3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Zcchc9Q8R1J3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.67■■□□□ 1.38
Zcchc9Q8R1J3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Zcchc9Q8R1J3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Zcchc9Q8R1J3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Zcchc9Q8R1J3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Zcchc9Q8R1J3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Zcchc9Q8R1J3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Zcchc9Q8R1J3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Zcchc9Q8R1J3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Zcchc9Q8R1J3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Zcchc9Q8R1J3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Zcchc9Q8R1J3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.63■■□□□ 1.37
Zcchc9Q8R1J3 Gm6311-201ENSMUST00000073790 878 ntBASIC23.63■■□□□ 1.37
Zcchc9Q8R1J3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Zcchc9Q8R1J3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Zcchc9Q8R1J3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Zcchc9Q8R1J3 Amer2-203ENSMUST00000225247 2662 ntBASIC23.62■■□□□ 1.37
Zcchc9Q8R1J3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Zcchc9Q8R1J3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Zcchc9Q8R1J3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Zcchc9Q8R1J3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.6■■□□□ 1.37
Zcchc9Q8R1J3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Zcchc9Q8R1J3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Zcchc9Q8R1J3 Gm30023-201ENSMUST00000197970 889 ntBASIC23.59■■□□□ 1.37
Zcchc9Q8R1J3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Zcchc9Q8R1J3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Zcchc9Q8R1J3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Zcchc9Q8R1J3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Zcchc9Q8R1J3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Zcchc9Q8R1J3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Zcchc9Q8R1J3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.57■■□□□ 1.36
Zcchc9Q8R1J3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Zcchc9Q8R1J3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Zcchc9Q8R1J3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.55■■□□□ 1.36
Zcchc9Q8R1J3 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.55■■□□□ 1.36
Zcchc9Q8R1J3 Particl-201ENSMUST00000205370 1560 ntBASIC23.54■■□□□ 1.36
Zcchc9Q8R1J3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Zcchc9Q8R1J3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Zcchc9Q8R1J3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Zcchc9Q8R1J3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Zcchc9Q8R1J3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Zcchc9Q8R1J3 Cap2-205ENSMUST00000225824 1634 ntBASIC23.53■■□□□ 1.36
Zcchc9Q8R1J3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Zcchc9Q8R1J3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Zcchc9Q8R1J3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Zcchc9Q8R1J3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.52■■□□□ 1.35
Zcchc9Q8R1J3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
Zcchc9Q8R1J3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Zcchc9Q8R1J3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Zcchc9Q8R1J3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Zcchc9Q8R1J3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms