Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc187Q8C5V8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.51■■□□□ 1.51
Ccdc187Q8C5V8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc187Q8C5V8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc187Q8C5V8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.49■■□□□ 1.51
Ccdc187Q8C5V8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ccdc187Q8C5V8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ccdc187Q8C5V8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ccdc187Q8C5V8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ccdc187Q8C5V8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ccdc187Q8C5V8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ccdc187Q8C5V8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ccdc187Q8C5V8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.45■■□□□ 1.5
Ccdc187Q8C5V8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ccdc187Q8C5V8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc187Q8C5V8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc187Q8C5V8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc187Q8C5V8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ccdc187Q8C5V8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.43■■□□□ 1.5
Ccdc187Q8C5V8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ccdc187Q8C5V8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc187Q8C5V8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc187Q8C5V8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc187Q8C5V8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc187Q8C5V8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc187Q8C5V8 Particl-201ENSMUST00000205370 1560 ntBASIC24.39■■□□□ 1.5
Ccdc187Q8C5V8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.39■■□□□ 1.49
Ccdc187Q8C5V8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Ccdc187Q8C5V8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ccdc187Q8C5V8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ccdc187Q8C5V8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ccdc187Q8C5V8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.36■■□□□ 1.49
Ccdc187Q8C5V8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Ccdc187Q8C5V8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Ccdc187Q8C5V8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ccdc187Q8C5V8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ccdc187Q8C5V8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ccdc187Q8C5V8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ccdc187Q8C5V8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ccdc187Q8C5V8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Ccdc187Q8C5V8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.32■■□□□ 1.48
Ccdc187Q8C5V8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.31■■□□□ 1.48
Ccdc187Q8C5V8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc187Q8C5V8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.31■■□□□ 1.48
Ccdc187Q8C5V8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc187Q8C5V8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc187Q8C5V8 Gm11175-201ENSMUST00000116172 543 ntBASIC24.31■■□□□ 1.48
Ccdc187Q8C5V8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Ccdc187Q8C5V8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ccdc187Q8C5V8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.3■■□□□ 1.48
Ccdc187Q8C5V8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ccdc187Q8C5V8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Ccdc187Q8C5V8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc187Q8C5V8 Zxda-201ENSMUST00000117281 2621 ntBASIC24.27■■□□□ 1.48
Ccdc187Q8C5V8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Ccdc187Q8C5V8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ccdc187Q8C5V8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ccdc187Q8C5V8 Mir6538-201ENSMUST00000183713 110 ntBASIC24.26■■□□□ 1.47
Ccdc187Q8C5V8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ccdc187Q8C5V8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ccdc187Q8C5V8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc187Q8C5V8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ccdc187Q8C5V8 Gm6311-201ENSMUST00000073790 878 ntBASIC24.25■■□□□ 1.47
Ccdc187Q8C5V8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ccdc187Q8C5V8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Ccdc187Q8C5V8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ccdc187Q8C5V8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.22■■□□□ 1.47
Ccdc187Q8C5V8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ccdc187Q8C5V8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Ccdc187Q8C5V8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ccdc187Q8C5V8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ccdc187Q8C5V8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.21■■□□□ 1.47
Ccdc187Q8C5V8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ccdc187Q8C5V8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Ccdc187Q8C5V8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ccdc187Q8C5V8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ccdc187Q8C5V8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Ccdc187Q8C5V8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.18■■□□□ 1.46
Ccdc187Q8C5V8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.17■■□□□ 1.46
Ccdc187Q8C5V8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ccdc187Q8C5V8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.15■■□□□ 1.46
Ccdc187Q8C5V8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Ccdc187Q8C5V8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ccdc187Q8C5V8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.13■■□□□ 1.45
Ccdc187Q8C5V8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.12■■□□□ 1.45
Ccdc187Q8C5V8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ccdc187Q8C5V8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ccdc187Q8C5V8 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.11■■□□□ 1.45
Ccdc187Q8C5V8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ccdc187Q8C5V8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ccdc187Q8C5V8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.1■■□□□ 1.45
Ccdc187Q8C5V8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ccdc187Q8C5V8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ccdc187Q8C5V8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.1■■□□□ 1.45
Ccdc187Q8C5V8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Ccdc187Q8C5V8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ccdc187Q8C5V8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.09■■□□□ 1.45
Ccdc187Q8C5V8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ccdc187Q8C5V8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Ccdc187Q8C5V8 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.07■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms