Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
4933409G03RikQ8C5U0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
4933409G03RikQ8C5U0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
4933409G03RikQ8C5U0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
4933409G03RikQ8C5U0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.32■■□□□ 1.8
4933409G03RikQ8C5U0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.31■■□□□ 1.8
4933409G03RikQ8C5U0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
4933409G03RikQ8C5U0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
4933409G03RikQ8C5U0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
4933409G03RikQ8C5U0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
4933409G03RikQ8C5U0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.29■■□□□ 1.8
4933409G03RikQ8C5U0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
4933409G03RikQ8C5U0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
4933409G03RikQ8C5U0 Particl-201ENSMUST00000205370 1560 ntBASIC26.28■■□□□ 1.8
4933409G03RikQ8C5U0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
4933409G03RikQ8C5U0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
4933409G03RikQ8C5U0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.25■■□□□ 1.79
4933409G03RikQ8C5U0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
4933409G03RikQ8C5U0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
4933409G03RikQ8C5U0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
4933409G03RikQ8C5U0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.23■■□□□ 1.79
4933409G03RikQ8C5U0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
4933409G03RikQ8C5U0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.22■■□□□ 1.79
4933409G03RikQ8C5U0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
4933409G03RikQ8C5U0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
4933409G03RikQ8C5U0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
4933409G03RikQ8C5U0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
4933409G03RikQ8C5U0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
4933409G03RikQ8C5U0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
4933409G03RikQ8C5U0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.2■■□□□ 1.78
4933409G03RikQ8C5U0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
4933409G03RikQ8C5U0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.15■■□□□ 1.78
4933409G03RikQ8C5U0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
4933409G03RikQ8C5U0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
4933409G03RikQ8C5U0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.14■■□□□ 1.78
4933409G03RikQ8C5U0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
4933409G03RikQ8C5U0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.77
4933409G03RikQ8C5U0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
4933409G03RikQ8C5U0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
4933409G03RikQ8C5U0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
4933409G03RikQ8C5U0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
4933409G03RikQ8C5U0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
4933409G03RikQ8C5U0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.12■■□□□ 1.77
4933409G03RikQ8C5U0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
4933409G03RikQ8C5U0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
4933409G03RikQ8C5U0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
4933409G03RikQ8C5U0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
4933409G03RikQ8C5U0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
4933409G03RikQ8C5U0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
4933409G03RikQ8C5U0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
4933409G03RikQ8C5U0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.09■■□□□ 1.77
4933409G03RikQ8C5U0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
4933409G03RikQ8C5U0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
4933409G03RikQ8C5U0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
4933409G03RikQ8C5U0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.07■■□□□ 1.76
4933409G03RikQ8C5U0 Zxda-201ENSMUST00000117281 2621 ntBASIC26.07■■□□□ 1.76
4933409G03RikQ8C5U0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
4933409G03RikQ8C5U0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
4933409G03RikQ8C5U0 Gm6311-201ENSMUST00000073790 878 ntBASIC26.06■■□□□ 1.76
4933409G03RikQ8C5U0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
4933409G03RikQ8C5U0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
4933409G03RikQ8C5U0 Mir6538-201ENSMUST00000183713 110 ntBASIC26.05■■□□□ 1.76
4933409G03RikQ8C5U0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
4933409G03RikQ8C5U0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
4933409G03RikQ8C5U0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.04■■□□□ 1.76
4933409G03RikQ8C5U0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
4933409G03RikQ8C5U0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
4933409G03RikQ8C5U0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26■■□□□ 1.75
4933409G03RikQ8C5U0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
4933409G03RikQ8C5U0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
4933409G03RikQ8C5U0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
4933409G03RikQ8C5U0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
4933409G03RikQ8C5U0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
4933409G03RikQ8C5U0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
4933409G03RikQ8C5U0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
4933409G03RikQ8C5U0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.97■■□□□ 1.75
4933409G03RikQ8C5U0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.75
4933409G03RikQ8C5U0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
4933409G03RikQ8C5U0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
4933409G03RikQ8C5U0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.95■■□□□ 1.74
4933409G03RikQ8C5U0 Gm11175-201ENSMUST00000116172 543 ntBASIC25.94■■□□□ 1.74
4933409G03RikQ8C5U0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.94■■□□□ 1.74
4933409G03RikQ8C5U0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
4933409G03RikQ8C5U0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.94■■□□□ 1.74
4933409G03RikQ8C5U0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
4933409G03RikQ8C5U0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
4933409G03RikQ8C5U0 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.92■■□□□ 1.74
4933409G03RikQ8C5U0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
4933409G03RikQ8C5U0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
4933409G03RikQ8C5U0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
4933409G03RikQ8C5U0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
4933409G03RikQ8C5U0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
4933409G03RikQ8C5U0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.91■■□□□ 1.74
4933409G03RikQ8C5U0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.88■■□□□ 1.73
4933409G03RikQ8C5U0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
4933409G03RikQ8C5U0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.88■■□□□ 1.73
4933409G03RikQ8C5U0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
4933409G03RikQ8C5U0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
4933409G03RikQ8C5U0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.87■■□□□ 1.73
4933409G03RikQ8C5U0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms