Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cdk5rap1Q8BTW8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Cdk5rap1Q8BTW8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.89■■□□□ 1.25
Cdk5rap1Q8BTW8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cdk5rap1Q8BTW8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.89■■□□□ 1.25
Cdk5rap1Q8BTW8 Gm30023-201ENSMUST00000197970 889 ntBASIC22.89■■□□□ 1.25
Cdk5rap1Q8BTW8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cdk5rap1Q8BTW8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cdk5rap1Q8BTW8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.88■■□□□ 1.25
Cdk5rap1Q8BTW8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cdk5rap1Q8BTW8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cdk5rap1Q8BTW8 Gm11599-201ENSMUST00000118720 878 ntBASIC22.85■■□□□ 1.25
Cdk5rap1Q8BTW8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cdk5rap1Q8BTW8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cdk5rap1Q8BTW8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.84■■□□□ 1.25
Cdk5rap1Q8BTW8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cdk5rap1Q8BTW8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cdk5rap1Q8BTW8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cdk5rap1Q8BTW8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cdk5rap1Q8BTW8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cdk5rap1Q8BTW8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cdk5rap1Q8BTW8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.82■■□□□ 1.24
Cdk5rap1Q8BTW8 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.82■■□□□ 1.24
Cdk5rap1Q8BTW8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.82■■□□□ 1.24
Cdk5rap1Q8BTW8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.82■■□□□ 1.24
Cdk5rap1Q8BTW8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cdk5rap1Q8BTW8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Cdk5rap1Q8BTW8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Cdk5rap1Q8BTW8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cdk5rap1Q8BTW8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cdk5rap1Q8BTW8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cdk5rap1Q8BTW8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Cdk5rap1Q8BTW8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cdk5rap1Q8BTW8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Cdk5rap1Q8BTW8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Cdk5rap1Q8BTW8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.78■■□□□ 1.24
Cdk5rap1Q8BTW8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cdk5rap1Q8BTW8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cdk5rap1Q8BTW8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cdk5rap1Q8BTW8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cdk5rap1Q8BTW8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.77■■□□□ 1.24
Cdk5rap1Q8BTW8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Cdk5rap1Q8BTW8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.74■■□□□ 1.23
Cdk5rap1Q8BTW8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cdk5rap1Q8BTW8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cdk5rap1Q8BTW8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Cdk5rap1Q8BTW8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Cdk5rap1Q8BTW8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cdk5rap1Q8BTW8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Cdk5rap1Q8BTW8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.7■■□□□ 1.22
Cdk5rap1Q8BTW8 Particl-201ENSMUST00000205370 1560 ntBASIC22.7■■□□□ 1.22
Cdk5rap1Q8BTW8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cdk5rap1Q8BTW8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cdk5rap1Q8BTW8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cdk5rap1Q8BTW8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cdk5rap1Q8BTW8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cdk5rap1Q8BTW8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cdk5rap1Q8BTW8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Cdk5rap1Q8BTW8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cdk5rap1Q8BTW8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Cdk5rap1Q8BTW8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cdk5rap1Q8BTW8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cdk5rap1Q8BTW8 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.64■■□□□ 1.22
Cdk5rap1Q8BTW8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.64■■□□□ 1.22
Cdk5rap1Q8BTW8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
Cdk5rap1Q8BTW8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.63■■□□□ 1.21
Cdk5rap1Q8BTW8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cdk5rap1Q8BTW8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Cdk5rap1Q8BTW8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cdk5rap1Q8BTW8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cdk5rap1Q8BTW8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Cdk5rap1Q8BTW8 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.61■■□□□ 1.21
Cdk5rap1Q8BTW8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Cdk5rap1Q8BTW8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cdk5rap1Q8BTW8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
Cdk5rap1Q8BTW8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cdk5rap1Q8BTW8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Cdk5rap1Q8BTW8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.59■■□□□ 1.21
Cdk5rap1Q8BTW8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdk5rap1Q8BTW8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
Cdk5rap1Q8BTW8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Cdk5rap1Q8BTW8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Cdk5rap1Q8BTW8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Cdk5rap1Q8BTW8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.57■■□□□ 1.2
Cdk5rap1Q8BTW8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cdk5rap1Q8BTW8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdk5rap1Q8BTW8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cdk5rap1Q8BTW8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.55■■□□□ 1.2
Cdk5rap1Q8BTW8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cdk5rap1Q8BTW8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cdk5rap1Q8BTW8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.53■■□□□ 1.2
Cdk5rap1Q8BTW8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cdk5rap1Q8BTW8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cdk5rap1Q8BTW8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.53■■□□□ 1.2
Cdk5rap1Q8BTW8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cdk5rap1Q8BTW8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.52■■□□□ 1.19
Cdk5rap1Q8BTW8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cdk5rap1Q8BTW8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cdk5rap1Q8BTW8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cdk5rap1Q8BTW8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms