Protein–RNA interactions for Protein: Q8BNV1

Trmt2a, tRNA (uracil-5-)-methyltransferase homolog A, mousemouse

Known RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trmt2aQ8BNV1 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.43■■■□□ 2.14
Trmt2aQ8BNV1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Trmt2aQ8BNV1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Trmt2aQ8BNV1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Trmt2aQ8BNV1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Trmt2aQ8BNV1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Trmt2aQ8BNV1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Trmt2aQ8BNV1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Trmt2aQ8BNV1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Trmt2aQ8BNV1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Trmt2aQ8BNV1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Trmt2aQ8BNV1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Trmt2aQ8BNV1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Trmt2aQ8BNV1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Trmt2aQ8BNV1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Trmt2aQ8BNV1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.34■■■□□ 2.13
Trmt2aQ8BNV1 Zxda-201ENSMUST00000117281 2621 ntBASIC28.33■■■□□ 2.13
Trmt2aQ8BNV1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Trmt2aQ8BNV1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trmt2aQ8BNV1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.32■■■□□ 2.12
Trmt2aQ8BNV1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Trmt2aQ8BNV1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.31■■■□□ 2.12
Trmt2aQ8BNV1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Trmt2aQ8BNV1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.3■■■□□ 2.12
Trmt2aQ8BNV1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
Trmt2aQ8BNV1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Trmt2aQ8BNV1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Trmt2aQ8BNV1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Trmt2aQ8BNV1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Trmt2aQ8BNV1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Trmt2aQ8BNV1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.26■■■□□ 2.11
Trmt2aQ8BNV1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Trmt2aQ8BNV1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Trmt2aQ8BNV1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
Trmt2aQ8BNV1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trmt2aQ8BNV1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trmt2aQ8BNV1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Trmt2aQ8BNV1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
Trmt2aQ8BNV1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Trmt2aQ8BNV1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.23■■■□□ 2.11
Trmt2aQ8BNV1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trmt2aQ8BNV1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.22■■■□□ 2.11
Trmt2aQ8BNV1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trmt2aQ8BNV1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Trmt2aQ8BNV1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.2■■■□□ 2.1
Trmt2aQ8BNV1 Particl-201ENSMUST00000205370 1560 ntBASIC28.19■■■□□ 2.1
Trmt2aQ8BNV1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Trmt2aQ8BNV1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.18■■■□□ 2.1
Trmt2aQ8BNV1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.17■■■□□ 2.1
Trmt2aQ8BNV1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trmt2aQ8BNV1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Trmt2aQ8BNV1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Trmt2aQ8BNV1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Trmt2aQ8BNV1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Trmt2aQ8BNV1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
Trmt2aQ8BNV1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Trmt2aQ8BNV1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Trmt2aQ8BNV1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Trmt2aQ8BNV1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
Trmt2aQ8BNV1 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.11■■■□□ 2.09
Trmt2aQ8BNV1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Trmt2aQ8BNV1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Trmt2aQ8BNV1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.11■■■□□ 2.09
Trmt2aQ8BNV1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Trmt2aQ8BNV1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Trmt2aQ8BNV1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
Trmt2aQ8BNV1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trmt2aQ8BNV1 Gm11175-201ENSMUST00000116172 543 ntBASIC28.08■■■□□ 2.09
Trmt2aQ8BNV1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Trmt2aQ8BNV1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trmt2aQ8BNV1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
Trmt2aQ8BNV1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Trmt2aQ8BNV1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.08■■■□□ 2.08
Trmt2aQ8BNV1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Trmt2aQ8BNV1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.05■■■□□ 2.08
Trmt2aQ8BNV1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
Trmt2aQ8BNV1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
Trmt2aQ8BNV1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.04■■■□□ 2.08
Trmt2aQ8BNV1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Trmt2aQ8BNV1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Trmt2aQ8BNV1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.01■■■□□ 2.07
Trmt2aQ8BNV1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Trmt2aQ8BNV1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
Trmt2aQ8BNV1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Trmt2aQ8BNV1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Trmt2aQ8BNV1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Trmt2aQ8BNV1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Trmt2aQ8BNV1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Trmt2aQ8BNV1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
Trmt2aQ8BNV1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Trmt2aQ8BNV1 Gm6311-201ENSMUST00000073790 878 ntBASIC27.96■■■□□ 2.07
Trmt2aQ8BNV1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.95■■■□□ 2.06
Trmt2aQ8BNV1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
Trmt2aQ8BNV1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.94■■■□□ 2.06
Trmt2aQ8BNV1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.94■■■□□ 2.06
Trmt2aQ8BNV1 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.94■■■□□ 2.06
Trmt2aQ8BNV1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Trmt2aQ8BNV1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.93■■■□□ 2.06
Trmt2aQ8BNV1 Mir6538-201ENSMUST00000183713 110 ntBASIC27.93■■■□□ 2.06
Trmt2aQ8BNV1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms