Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3hc1Q80YV2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3hc1Q80YV2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3hc1Q80YV2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3hc1Q80YV2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Zc3hc1Q80YV2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3hc1Q80YV2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3hc1Q80YV2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Zc3hc1Q80YV2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3hc1Q80YV2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3hc1Q80YV2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3hc1Q80YV2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3hc1Q80YV2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Zc3hc1Q80YV2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3hc1Q80YV2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3hc1Q80YV2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3hc1Q80YV2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Zc3hc1Q80YV2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.7■■□□□ 1.06
Zc3hc1Q80YV2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Zc3hc1Q80YV2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zc3hc1Q80YV2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Zc3hc1Q80YV2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Zc3hc1Q80YV2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3hc1Q80YV2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3hc1Q80YV2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zc3hc1Q80YV2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Zc3hc1Q80YV2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zc3hc1Q80YV2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zc3hc1Q80YV2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Zc3hc1Q80YV2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Zc3hc1Q80YV2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Zc3hc1Q80YV2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Zc3hc1Q80YV2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Zc3hc1Q80YV2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Zc3hc1Q80YV2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Zc3hc1Q80YV2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Zc3hc1Q80YV2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Zc3hc1Q80YV2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Zc3hc1Q80YV2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Zc3hc1Q80YV2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Zc3hc1Q80YV2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Zc3hc1Q80YV2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.63■■□□□ 1.05
Zc3hc1Q80YV2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Zc3hc1Q80YV2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Zc3hc1Q80YV2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Zc3hc1Q80YV2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Zc3hc1Q80YV2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Zc3hc1Q80YV2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Zc3hc1Q80YV2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Zc3hc1Q80YV2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Zc3hc1Q80YV2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Zc3hc1Q80YV2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Zc3hc1Q80YV2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Zc3hc1Q80YV2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.6■■□□□ 1.05
Zc3hc1Q80YV2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Zc3hc1Q80YV2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Zc3hc1Q80YV2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Zc3hc1Q80YV2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Zc3hc1Q80YV2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Zc3hc1Q80YV2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Zc3hc1Q80YV2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Zc3hc1Q80YV2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Zc3hc1Q80YV2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Zc3hc1Q80YV2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Zc3hc1Q80YV2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Zc3hc1Q80YV2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.56■■□□□ 1.04
Zc3hc1Q80YV2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zc3hc1Q80YV2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Zc3hc1Q80YV2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Zc3hc1Q80YV2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Zc3hc1Q80YV2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Zc3hc1Q80YV2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Zc3hc1Q80YV2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Zc3hc1Q80YV2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Zc3hc1Q80YV2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Zc3hc1Q80YV2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Zc3hc1Q80YV2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Zc3hc1Q80YV2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Zc3hc1Q80YV2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Zc3hc1Q80YV2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Zc3hc1Q80YV2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Zc3hc1Q80YV2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc3hc1Q80YV2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc3hc1Q80YV2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Zc3hc1Q80YV2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Zc3hc1Q80YV2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Zc3hc1Q80YV2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Zc3hc1Q80YV2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zc3hc1Q80YV2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zc3hc1Q80YV2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.48■■□□□ 1.03
Zc3hc1Q80YV2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.48■■□□□ 1.03
Zc3hc1Q80YV2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Zc3hc1Q80YV2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3hc1Q80YV2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3hc1Q80YV2 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Zc3hc1Q80YV2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3hc1Q80YV2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3hc1Q80YV2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3hc1Q80YV2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3hc1Q80YV2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms