Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Pif1Q80SX8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pif1Q80SX8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pif1Q80SX8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pif1Q80SX8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pif1Q80SX8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pif1Q80SX8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pif1Q80SX8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.1■■□□□ 1.13
Pif1Q80SX8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pif1Q80SX8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pif1Q80SX8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pif1Q80SX8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.08■■□□□ 1.13
Pif1Q80SX8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pif1Q80SX8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pif1Q80SX8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.07■■□□□ 1.12
Pif1Q80SX8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pif1Q80SX8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pif1Q80SX8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pif1Q80SX8 Gm30023-201ENSMUST00000197970 889 ntBASIC22.06■■□□□ 1.12
Pif1Q80SX8 Gm6311-201ENSMUST00000073790 878 ntBASIC22.06■■□□□ 1.12
Pif1Q80SX8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pif1Q80SX8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Pif1Q80SX8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pif1Q80SX8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pif1Q80SX8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pif1Q80SX8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pif1Q80SX8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.04■■□□□ 1.12
Pif1Q80SX8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Pif1Q80SX8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pif1Q80SX8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pif1Q80SX8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Pif1Q80SX8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Pif1Q80SX8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pif1Q80SX8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pif1Q80SX8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pif1Q80SX8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pif1Q80SX8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pif1Q80SX8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pif1Q80SX8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Pif1Q80SX8 Particl-201ENSMUST00000205370 1560 ntBASIC22■■□□□ 1.11
Pif1Q80SX8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pif1Q80SX8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Pif1Q80SX8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Pif1Q80SX8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pif1Q80SX8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pif1Q80SX8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pif1Q80SX8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pif1Q80SX8 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.97■■□□□ 1.11
Pif1Q80SX8 Cap2-205ENSMUST00000225824 1634 ntBASIC21.96■■□□□ 1.11
Pif1Q80SX8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Pif1Q80SX8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pif1Q80SX8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.96■■□□□ 1.11
Pif1Q80SX8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pif1Q80SX8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.94■■□□□ 1.1
Pif1Q80SX8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pif1Q80SX8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pif1Q80SX8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pif1Q80SX8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Pif1Q80SX8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pif1Q80SX8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pif1Q80SX8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.93■■□□□ 1.1
Pif1Q80SX8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pif1Q80SX8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pif1Q80SX8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.92■■□□□ 1.1
Pif1Q80SX8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.92■■□□□ 1.1
Pif1Q80SX8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pif1Q80SX8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Pif1Q80SX8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pif1Q80SX8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.9■■□□□ 1.1
Pif1Q80SX8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pif1Q80SX8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pif1Q80SX8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pif1Q80SX8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pif1Q80SX8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.87■■□□□ 1.09
Pif1Q80SX8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pif1Q80SX8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pif1Q80SX8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pif1Q80SX8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pif1Q80SX8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pif1Q80SX8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Pif1Q80SX8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.85■■□□□ 1.09
Pif1Q80SX8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pif1Q80SX8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pif1Q80SX8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pif1Q80SX8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pif1Q80SX8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pif1Q80SX8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Pif1Q80SX8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pif1Q80SX8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Pif1Q80SX8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pif1Q80SX8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pif1Q80SX8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pif1Q80SX8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pif1Q80SX8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.8■■□□□ 1.08
Pif1Q80SX8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.79■■□□□ 1.08
Pif1Q80SX8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pif1Q80SX8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pif1Q80SX8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pif1Q80SX8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Pif1Q80SX8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms