Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
Chd4Q6PDQ2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Chd4Q6PDQ2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC32.48■■■□□ 2.79
Chd4Q6PDQ2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Chd4Q6PDQ2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Chd4Q6PDQ2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Chd4Q6PDQ2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Chd4Q6PDQ2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Chd4Q6PDQ2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC32.46■■■□□ 2.79
Chd4Q6PDQ2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Chd4Q6PDQ2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
Chd4Q6PDQ2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Chd4Q6PDQ2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Chd4Q6PDQ2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Chd4Q6PDQ2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Chd4Q6PDQ2 Pcf11-205ENSMUST00000208255 1720 ntBASIC32.42■■■□□ 2.78
Chd4Q6PDQ2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC32.42■■■□□ 2.78
Chd4Q6PDQ2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Chd4Q6PDQ2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Chd4Q6PDQ2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC32.41■■■□□ 2.78
Chd4Q6PDQ2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
Chd4Q6PDQ2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Chd4Q6PDQ2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC32.39■■■□□ 2.78
Chd4Q6PDQ2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Chd4Q6PDQ2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Chd4Q6PDQ2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Chd4Q6PDQ2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Chd4Q6PDQ2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Chd4Q6PDQ2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC32.37■■■□□ 2.77
Chd4Q6PDQ2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Chd4Q6PDQ2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Chd4Q6PDQ2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC32.36■■■□□ 2.77
Chd4Q6PDQ2 Particl-201ENSMUST00000205370 1560 ntBASIC32.35■■■□□ 2.77
Chd4Q6PDQ2 Mir6538-201ENSMUST00000183713 110 ntBASIC32.35■■■□□ 2.77
Chd4Q6PDQ2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Chd4Q6PDQ2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Chd4Q6PDQ2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Chd4Q6PDQ2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
Chd4Q6PDQ2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Chd4Q6PDQ2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Chd4Q6PDQ2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Chd4Q6PDQ2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC32.31■■■□□ 2.76
Chd4Q6PDQ2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Chd4Q6PDQ2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Chd4Q6PDQ2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC32.28■■■□□ 2.76
Chd4Q6PDQ2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC32.25■■■□□ 2.75
Chd4Q6PDQ2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC32.23■■■□□ 2.75
Chd4Q6PDQ2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
Chd4Q6PDQ2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC32.22■■■□□ 2.75
Chd4Q6PDQ2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Chd4Q6PDQ2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Chd4Q6PDQ2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.74
Chd4Q6PDQ2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Chd4Q6PDQ2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
Chd4Q6PDQ2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Chd4Q6PDQ2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC32.17■■■□□ 2.74
Chd4Q6PDQ2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
Chd4Q6PDQ2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC32.16■■■□□ 2.74
Chd4Q6PDQ2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Chd4Q6PDQ2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
Chd4Q6PDQ2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC32.16■■■□□ 2.74
Chd4Q6PDQ2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Chd4Q6PDQ2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Chd4Q6PDQ2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Chd4Q6PDQ2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC32.14■■■□□ 2.74
Chd4Q6PDQ2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Chd4Q6PDQ2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC32.13■■■□□ 2.73
Chd4Q6PDQ2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Chd4Q6PDQ2 Gm6311-201ENSMUST00000073790 878 ntBASIC32.12■■■□□ 2.73
Chd4Q6PDQ2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
Chd4Q6PDQ2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
Chd4Q6PDQ2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Chd4Q6PDQ2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Chd4Q6PDQ2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
Chd4Q6PDQ2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Chd4Q6PDQ2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Chd4Q6PDQ2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Chd4Q6PDQ2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Chd4Q6PDQ2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Chd4Q6PDQ2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC32.06■■■□□ 2.72
Chd4Q6PDQ2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Chd4Q6PDQ2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Chd4Q6PDQ2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Chd4Q6PDQ2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Chd4Q6PDQ2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC32.01■■■□□ 2.72
Chd4Q6PDQ2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Chd4Q6PDQ2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Chd4Q6PDQ2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Chd4Q6PDQ2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
Chd4Q6PDQ2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Chd4Q6PDQ2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
Chd4Q6PDQ2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Chd4Q6PDQ2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Chd4Q6PDQ2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.98■■■□□ 2.71
Chd4Q6PDQ2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Chd4Q6PDQ2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Chd4Q6PDQ2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Chd4Q6PDQ2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Chd4Q6PDQ2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Chd4Q6PDQ2 Zxda-201ENSMUST00000117281 2621 ntBASIC31.96■■■□□ 2.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms