Protein–RNA interactions for Protein: Q66JY6

Arhgef39, Rho guanine nucleotide exchange factor 39, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef39Q66JY6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Arhgef39Q66JY6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Arhgef39Q66JY6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Arhgef39Q66JY6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Arhgef39Q66JY6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Arhgef39Q66JY6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.49■■□□□ 1.03
Arhgef39Q66JY6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Arhgef39Q66JY6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Arhgef39Q66JY6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Arhgef39Q66JY6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Arhgef39Q66JY6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Arhgef39Q66JY6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Arhgef39Q66JY6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Arhgef39Q66JY6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Arhgef39Q66JY6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Arhgef39Q66JY6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Arhgef39Q66JY6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Arhgef39Q66JY6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Arhgef39Q66JY6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.43■■□□□ 1.02
Arhgef39Q66JY6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Arhgef39Q66JY6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Arhgef39Q66JY6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Arhgef39Q66JY6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Arhgef39Q66JY6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Arhgef39Q66JY6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.41■■□□□ 1.02
Arhgef39Q66JY6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Arhgef39Q66JY6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Arhgef39Q66JY6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Arhgef39Q66JY6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Arhgef39Q66JY6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Arhgef39Q66JY6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Arhgef39Q66JY6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Arhgef39Q66JY6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.39■■□□□ 1.01
Arhgef39Q66JY6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Arhgef39Q66JY6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Arhgef39Q66JY6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Arhgef39Q66JY6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Arhgef39Q66JY6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Arhgef39Q66JY6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Arhgef39Q66JY6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Arhgef39Q66JY6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Arhgef39Q66JY6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Arhgef39Q66JY6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Arhgef39Q66JY6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Arhgef39Q66JY6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Arhgef39Q66JY6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Arhgef39Q66JY6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Arhgef39Q66JY6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Arhgef39Q66JY6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Arhgef39Q66JY6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.31■■□□□ 1
Arhgef39Q66JY6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Arhgef39Q66JY6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Arhgef39Q66JY6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.3■■□□□ 1
Arhgef39Q66JY6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Arhgef39Q66JY6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Arhgef39Q66JY6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Arhgef39Q66JY6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Arhgef39Q66JY6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Arhgef39Q66JY6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Arhgef39Q66JY6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Arhgef39Q66JY6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.28■■□□□ 1
Arhgef39Q66JY6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Arhgef39Q66JY6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Arhgef39Q66JY6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Arhgef39Q66JY6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef39Q66JY6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Arhgef39Q66JY6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Arhgef39Q66JY6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Arhgef39Q66JY6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Arhgef39Q66JY6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef39Q66JY6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef39Q66JY6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef39Q66JY6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef39Q66JY6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef39Q66JY6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Arhgef39Q66JY6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Arhgef39Q66JY6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef39Q66JY6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef39Q66JY6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Arhgef39Q66JY6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.22■□□□□ 0.99
Arhgef39Q66JY6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.21■□□□□ 0.99
Arhgef39Q66JY6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef39Q66JY6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef39Q66JY6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Arhgef39Q66JY6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef39Q66JY6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Arhgef39Q66JY6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Arhgef39Q66JY6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef39Q66JY6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef39Q66JY6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Arhgef39Q66JY6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef39Q66JY6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef39Q66JY6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef39Q66JY6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.19■□□□□ 0.98
Arhgef39Q66JY6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef39Q66JY6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.19■□□□□ 0.98
Arhgef39Q66JY6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Arhgef39Q66JY6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Arhgef39Q66JY6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Arhgef39Q66JY6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms