Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Znf48Q3US17 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Znf48Q3US17 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Znf48Q3US17 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.32■□□□□ 0.68
Znf48Q3US17 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.32■□□□□ 0.68
Znf48Q3US17 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.31■□□□□ 0.68
Znf48Q3US17 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf48Q3US17 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Znf48Q3US17 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Znf48Q3US17 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Znf48Q3US17 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Znf48Q3US17 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Znf48Q3US17 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.29■□□□□ 0.68
Znf48Q3US17 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Znf48Q3US17 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Znf48Q3US17 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf48Q3US17 Mir6538-201ENSMUST00000183713 110 ntBASIC19.28■□□□□ 0.68
Znf48Q3US17 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Znf48Q3US17 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf48Q3US17 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf48Q3US17 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Znf48Q3US17 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf48Q3US17 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Znf48Q3US17 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Znf48Q3US17 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Znf48Q3US17 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Znf48Q3US17 Amer2-203ENSMUST00000225247 2662 ntBASIC19.27■□□□□ 0.67
Znf48Q3US17 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Znf48Q3US17 Gm11175-201ENSMUST00000116172 543 ntBASIC19.26■□□□□ 0.67
Znf48Q3US17 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Znf48Q3US17 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.26■□□□□ 0.67
Znf48Q3US17 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.26■□□□□ 0.67
Znf48Q3US17 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Znf48Q3US17 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf48Q3US17 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Znf48Q3US17 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf48Q3US17 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Znf48Q3US17 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Znf48Q3US17 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Znf48Q3US17 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Znf48Q3US17 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Znf48Q3US17 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Znf48Q3US17 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Znf48Q3US17 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.2■□□□□ 0.66
Znf48Q3US17 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf48Q3US17 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf48Q3US17 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Znf48Q3US17 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Znf48Q3US17 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Znf48Q3US17 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Znf48Q3US17 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Znf48Q3US17 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Znf48Q3US17 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Znf48Q3US17 Cap2-205ENSMUST00000225824 1634 ntBASIC19.18■□□□□ 0.66
Znf48Q3US17 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Znf48Q3US17 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Znf48Q3US17 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Znf48Q3US17 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.17■□□□□ 0.66
Znf48Q3US17 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Znf48Q3US17 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Znf48Q3US17 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Znf48Q3US17 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Znf48Q3US17 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.16■□□□□ 0.66
Znf48Q3US17 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Znf48Q3US17 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Znf48Q3US17 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Znf48Q3US17 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.15■□□□□ 0.66
Znf48Q3US17 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Znf48Q3US17 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Znf48Q3US17 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Znf48Q3US17 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.14■□□□□ 0.65
Znf48Q3US17 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Znf48Q3US17 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Znf48Q3US17 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Znf48Q3US17 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Znf48Q3US17 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Znf48Q3US17 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Znf48Q3US17 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.13■□□□□ 0.65
Znf48Q3US17 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Znf48Q3US17 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Znf48Q3US17 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Znf48Q3US17 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Znf48Q3US17 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Znf48Q3US17 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Znf48Q3US17 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Znf48Q3US17 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Znf48Q3US17 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Znf48Q3US17 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Znf48Q3US17 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.12■□□□□ 0.65
Znf48Q3US17 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Znf48Q3US17 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Znf48Q3US17 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Znf48Q3US17 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.11■□□□□ 0.65
Znf48Q3US17 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
Znf48Q3US17 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Znf48Q3US17 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Znf48Q3US17 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Znf48Q3US17 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.09■□□□□ 0.65
Znf48Q3US17 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Znf48Q3US17 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms