Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 AAT1YKL106W 1356 nt8.38□□□□□ -1.07
RUP1Q12242 SRM1YGL097W 1449 nt8.37□□□□□ -1.07
RUP1Q12242 YRF1-1YDR545W 5391 nt8.37□□□□□ -1.07
RUP1Q12242 YRF1-5YLR467W 5391 nt8.37□□□□□ -1.07
RUP1Q12242 YRF1-8YOR396W 5391 nt8.37□□□□□ -1.07
RUP1Q12242 ADE8YDR408C 645 nt8.37□□□□□ -1.07
RUP1Q12242 CRC1YOR100C 984 nt8.37□□□□□ -1.07
RUP1Q12242 YMR210WYMR210W 1350 nt8.35□□□□□ -1.07
RUP1Q12242 SFL1YOR140W 2301 nt8.35□□□□□ -1.07
RUP1Q12242 YLR072WYLR072W 2082 nt8.35□□□□□ -1.07
RUP1Q12242 YMC2YBR104W 990 nt8.35□□□□□ -1.07
RUP1Q12242 YFR036W-AYFR036W-A 651 nt8.34□□□□□ -1.07
RUP1Q12242 SPS100YHR139C 981 nt8.34□□□□□ -1.07
RUP1Q12242 POT1YIL160C 1254 nt8.34□□□□□ -1.07
RUP1Q12242 OPI3YJR073C 621 nt8.34□□□□□ -1.07
RUP1Q12242 THI3YDL080C 1830 nt8.32□□□□□ -1.08
RUP1Q12242 ESS1YJR017C 513 nt8.32□□□□□ -1.08
RUP1Q12242 LPD1YFL018C 1500 nt8.32□□□□□ -1.08
RUP1Q12242 DIA4YHR011W 1341 nt8.31□□□□□ -1.08
RUP1Q12242 GGA2YHR108W 1758 nt8.31□□□□□ -1.08
RUP1Q12242 SWT21YNL187W 1074 nt8.31□□□□□ -1.08
RUP1Q12242 FTH1YBR207W 1398 nt8.31□□□□□ -1.08
RUP1Q12242 tS(GCU)LtS(GCU)L 80 nt8.3□□□□□ -1.08
RUP1Q12242 MET1YKR069W 1782 nt8.3□□□□□ -1.08
RUP1Q12242 TVP23YDR084C 600 nt8.29□□□□□ -1.08
RUP1Q12242 GSF2YML048W 1212 nt8.29□□□□□ -1.08
RUP1Q12242 YMR316C-BYMR316C-B 309 nt8.29□□□□□ -1.08
RUP1Q12242 PGC1YPL206C 966 nt8.29□□□□□ -1.08
RUP1Q12242 KGD2YDR148C 1392 nt8.29□□□□□ -1.08
RUP1Q12242 PFS2YNL317W 1398 nt8.28□□□□□ -1.08
RUP1Q12242 PAU5YFL020C 369 nt8.28□□□□□ -1.08
RUP1Q12242 TUB4YLR212C 1422 nt8.27□□□□□ -1.09
RUP1Q12242 MRS4YKR052C 915 nt8.26□□□□□ -1.09
RUP1Q12242 STP3YLR375W 1032 nt8.26□□□□□ -1.09
RUP1Q12242 LEA1YPL213W 717 nt8.26□□□□□ -1.09
RUP1Q12242 ABZ2YMR289W 1125 nt8.25□□□□□ -1.09
RUP1Q12242 NIF3YGL221C 867 nt8.24□□□□□ -1.09
RUP1Q12242 APS2YJR058C 444 nt8.24□□□□□ -1.09
RUP1Q12242 YBR232CYBR232C 360 nt8.24□□□□□ -1.09
RUP1Q12242 ILV2YMR108W 2064 nt8.24□□□□□ -1.09
RUP1Q12242 TPN1YGL186C 1740 nt8.23□□□□□ -1.09
RUP1Q12242 SBP1YHL034C 885 nt8.22□□□□□ -1.09
RUP1Q12242 MDH2YOL126C 1134 nt8.21□□□□□ -1.1
RUP1Q12242 DTR1YBR180W 1719 nt8.2□□□□□ -1.1
RUP1Q12242 snR86snR86 1004 nt8.2□□□□□ -1.1
RUP1Q12242 AAC3YBR085W 924 nt8.2□□□□□ -1.1
RUP1Q12242 GAL2YLR081W 1725 nt8.2□□□□□ -1.1
RUP1Q12242 SLM3YDL033C 1254 nt8.19□□□□□ -1.1
RUP1Q12242 PAR32YDL173W 888 nt8.19□□□□□ -1.1
RUP1Q12242 YKL053WYKL053W 375 nt8.19□□□□□ -1.1
RUP1Q12242 HSV2YGR223C 1347 nt8.19□□□□□ -1.1
RUP1Q12242 SAN1YDR143C 1833 nt8.18□□□□□ -1.1
RUP1Q12242 YNL190WYNL190W 615 nt8.17□□□□□ -1.1
RUP1Q12242 MET30YIL046W 1923 nt8.17□□□□□ -1.1
RUP1Q12242 ABP1YCR088W 1779 nt8.16□□□□□ -1.1
RUP1Q12242 AMF1YOR378W 1548 nt8.16□□□□□ -1.1
RUP1Q12242 ENO2YHR174W 1314 nt8.15□□□□□ -1.1
RUP1Q12242 SEN2YLR105C 1134 nt8.14□□□□□ -1.11
RUP1Q12242 HIS3YOR202W 663 nt8.14□□□□□ -1.11
RUP1Q12242 PMT7YDR307W 1989 nt8.13□□□□□ -1.11
RUP1Q12242 YDR510C-AYDR510C-A 117 nt8.12□□□□□ -1.11
RUP1Q12242 NAS2YIL007C 663 nt8.12□□□□□ -1.11
RUP1Q12242 CDD1YLR245C 429 nt8.12□□□□□ -1.11
RUP1Q12242 TMS1YDR105C 1422 nt8.12□□□□□ -1.11
RUP1Q12242 KRE1YNL322C 942 nt8.11□□□□□ -1.11
RUP1Q12242 TPC1YGR096W 945 nt8.1□□□□□ -1.11
RUP1Q12242 NAP1YKR048C 1254 nt8.1□□□□□ -1.11
RUP1Q12242 THP3YPR045C 1413 nt8.1□□□□□ -1.11
RUP1Q12242 IGD1YFR017C 588 nt8.09□□□□□ -1.11
RUP1Q12242 AIM34YMR003W 597 nt8.09□□□□□ -1.11
RUP1Q12242 LEU2YCL018W 1095 nt8.09□□□□□ -1.11
RUP1Q12242 LAS17YOR181W 1902 nt8.09□□□□□ -1.11
RUP1Q12242 ALR1YOL130W 2580 nt8.08□□□□□ -1.12
RUP1Q12242 YJL064WYJL064W 396 nt8.08□□□□□ -1.12
RUP1Q12242 FSH2YMR222C 672 nt8.08□□□□□ -1.12
RUP1Q12242 SPE2YOL052C 1191 nt8.08□□□□□ -1.12
RUP1Q12242 ITR1YDR497C 1755 nt8.07□□□□□ -1.12
RUP1Q12242 NDE2YDL085W 1638 nt8.07□□□□□ -1.12
RUP1Q12242 HEM14YER014W 1620 nt8.07□□□□□ -1.12
RUP1Q12242 GAS1YMR307W 1680 nt8.06□□□□□ -1.12
RUP1Q12242 SRP54YPR088C 1626 nt8.05□□□□□ -1.12
RUP1Q12242 LYS20YDL182W 1287 nt8.05□□□□□ -1.12
RUP1Q12242 YEL034C-AYEL034C-A 603 nt8.05□□□□□ -1.12
RUP1Q12242 PAU19YMR325W 375 nt8.05□□□□□ -1.12
RUP1Q12242 TIF3YPR163C 1311 nt8.04□□□□□ -1.12
RUP1Q12242 TOK1YJL093C 2076 nt8.04□□□□□ -1.12
RUP1Q12242 NAM8YHR086W 1572 nt8.04□□□□□ -1.12
RUP1Q12242 PRC1YMR297W 1599 nt8.03□□□□□ -1.12
RUP1Q12242 YJL009WYJL009W 327 nt8.02□□□□□ -1.13
RUP1Q12242 YNL140CYNL140C 570 nt8.02□□□□□ -1.13
RUP1Q12242 PTC6YCR079W 1329 nt8.02□□□□□ -1.13
RUP1Q12242 PUP1YOR157C 786 nt8.01□□□□□ -1.13
RUP1Q12242 YBR056WYBR056W 1506 nt8.01□□□□□ -1.13
RUP1Q12242 tA(AGC)DtA(AGC)D 73 nt8□□□□□ -1.13
RUP1Q12242 tA(AGC)FtA(AGC)F 73 nt8□□□□□ -1.13
RUP1Q12242 tA(AGC)GtA(AGC)G 73 nt8□□□□□ -1.13
RUP1Q12242 tA(AGC)HtA(AGC)H 73 nt8□□□□□ -1.13
RUP1Q12242 tA(AGC)JtA(AGC)J 73 nt8□□□□□ -1.13
RUP1Q12242 tA(AGC)K1tA(AGC)K1 73 nt8□□□□□ -1.13
RUP1Q12242 tA(AGC)K2tA(AGC)K2 73 nt8□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 38.7 ms