Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 APS2YJR058C 444 nt8.9□□□□□ -0.98
PUF3Q07807 SPE2YOL052C 1191 nt8.9□□□□□ -0.98
PUF3Q07807 LEU4YNL104C 1860 nt8.89□□□□□ -0.99
PUF3Q07807 KGD2YDR148C 1392 nt8.87□□□□□ -0.99
PUF3Q07807 YDR467CYDR467C 327 nt8.87□□□□□ -0.99
PUF3Q07807 YDR510C-AYDR510C-A 117 nt8.87□□□□□ -0.99
PUF3Q07807 tS(GCU)LtS(GCU)L 80 nt8.87□□□□□ -0.99
PUF3Q07807 NAM8YHR086W 1572 nt8.86□□□□□ -0.99
PUF3Q07807 YRF1-2YER190W 5046 nt8.86□□□□□ -0.99
PUF3Q07807 PET20YPL159C 762 nt8.85□□□□□ -0.99
PUF3Q07807 URA8YJR103W 1737 nt8.85□□□□□ -0.99
PUF3Q07807 AGP3YFL055W 1677 nt8.85□□□□□ -0.99
PUF3Q07807 HMT1YBR034C 1047 nt8.84□□□□□ -0.99
PUF3Q07807 SRP54YPR088C 1626 nt8.83□□□□□ -1
PUF3Q07807 STP3YLR375W 1032 nt8.83□□□□□ -1
PUF3Q07807 TOK1YJL093C 2076 nt8.83□□□□□ -1
PUF3Q07807 YNL067W-AYNL067W-A 147 nt8.82□□□□□ -1
PUF3Q07807 YHL008CYHL008C 1884 nt8.81□□□□□ -1
PUF3Q07807 SBP1YHL034C 885 nt8.81□□□□□ -1
PUF3Q07807 PGC1YPL206C 966 nt8.81□□□□□ -1
PUF3Q07807 SAN1YDR143C 1833 nt8.81□□□□□ -1
PUF3Q07807 ESS1YJR017C 513 nt8.8□□□□□ -1
PUF3Q07807 GPM1YKL152C 744 nt8.8□□□□□ -1
PUF3Q07807 THP3YPR045C 1413 nt8.8□□□□□ -1
PUF3Q07807 PAR32YDL173W 888 nt8.79□□□□□ -1
PUF3Q07807 NAS2YIL007C 663 nt8.79□□□□□ -1
PUF3Q07807 REX2YLR059C 810 nt8.79□□□□□ -1
PUF3Q07807 YCR099CYCR099C 468 nt8.78□□□□□ -1
PUF3Q07807 YKR012CYKR012C 378 nt8.78□□□□□ -1
PUF3Q07807 FSH2YMR222C 672 nt8.78□□□□□ -1
PUF3Q07807 YPL071CYPL071C 471 nt8.78□□□□□ -1
PUF3Q07807 GGA2YHR108W 1758 nt8.77□□□□□ -1.01
PUF3Q07807 NPP2YEL016C 1482 nt8.77□□□□□ -1.01
PUF3Q07807 tE(CUC)DtE(CUC)D 72 nt8.76□□□□□ -1.01
PUF3Q07807 tE(CUC)ItE(CUC)I 72 nt8.76□□□□□ -1.01
PUF3Q07807 IGD1YFR017C 588 nt8.76□□□□□ -1.01
PUF3Q07807 YJR154WYJR154W 1041 nt8.76□□□□□ -1.01
PUF3Q07807 SKG1YKR100C 1068 nt8.76□□□□□ -1.01
PUF3Q07807 YHM2YMR241W 945 nt8.76□□□□□ -1.01
PUF3Q07807 YBL095WYBL095W 813 nt8.76□□□□□ -1.01
PUF3Q07807 YMC2YBR104W 990 nt8.76□□□□□ -1.01
PUF3Q07807 GAS1YMR307W 1680 nt8.75□□□□□ -1.01
PUF3Q07807 snR78snR78 87 nt8.74□□□□□ -1.01
PUF3Q07807 THI3YDL080C 1830 nt8.74□□□□□ -1.01
PUF3Q07807 PTC6YCR079W 1329 nt8.74□□□□□ -1.01
PUF3Q07807 RSC4YKR008W 1878 nt8.73□□□□□ -1.01
PUF3Q07807 YPT11YNL304W 1254 nt8.72□□□□□ -1.01
PUF3Q07807 YBR232CYBR232C 360 nt8.72□□□□□ -1.01
PUF3Q07807 YMR316C-BYMR316C-B 309 nt8.71□□□□□ -1.02
PUF3Q07807 CDD1YLR245C 429 nt8.7□□□□□ -1.02
PUF3Q07807 SDS24YBR214W 1584 nt8.69□□□□□ -1.02
PUF3Q07807 MOB1YIL106W 945 nt8.69□□□□□ -1.02
PUF3Q07807 ADH3YMR083W 1128 nt8.69□□□□□ -1.02
PUF3Q07807 MAS1YLR163C 1389 nt8.69□□□□□ -1.02
PUF3Q07807 NBA1YOL070C 1506 nt8.69□□□□□ -1.02
PUF3Q07807 PHB2YGR231C 933 nt8.68□□□□□ -1.02 RIP-Chip
PUF3Q07807 AAT1YKL106W 1356 nt8.67□□□□□ -1.02
PUF3Q07807 MRS4YKR052C 915 nt8.67□□□□□ -1.02
PUF3Q07807 VBA3YCL069W 1377 nt8.66□□□□□ -1.02
PUF3Q07807 ENO1YGR254W 1314 nt8.66□□□□□ -1.02
PUF3Q07807 MTO1YGL236C 2010 nt8.65□□□□□ -1.02 RIP-Chip
PUF3Q07807 RSM7YJR113C 744 nt8.65□□□□□ -1.02 RIP-Chip
PUF3Q07807 tA(AGC)DtA(AGC)D 73 nt8.64□□□□□ -1.03
PUF3Q07807 tA(AGC)FtA(AGC)F 73 nt8.64□□□□□ -1.03
PUF3Q07807 tA(AGC)GtA(AGC)G 73 nt8.64□□□□□ -1.03
PUF3Q07807 tA(AGC)HtA(AGC)H 73 nt8.64□□□□□ -1.03
PUF3Q07807 tA(AGC)JtA(AGC)J 73 nt8.64□□□□□ -1.03
PUF3Q07807 tA(AGC)K1tA(AGC)K1 73 nt8.64□□□□□ -1.03
PUF3Q07807 tA(AGC)K2tA(AGC)K2 73 nt8.64□□□□□ -1.03
PUF3Q07807 tA(AGC)LtA(AGC)L 73 nt8.64□□□□□ -1.03
PUF3Q07807 tA(AGC)M1tA(AGC)M1 73 nt8.64□□□□□ -1.03
PUF3Q07807 tA(AGC)M2tA(AGC)M2 73 nt8.64□□□□□ -1.03
PUF3Q07807 AI3Q0060 1248 nt8.64□□□□□ -1.03
PUF3Q07807 tA(AGC)PtA(AGC)P 73 nt8.64□□□□□ -1.03
PUF3Q07807 LYS20YDL182W 1287 nt8.63□□□□□ -1.03 RIP-Chip
PUF3Q07807 SEN2YLR105C 1134 nt8.63□□□□□ -1.03
PUF3Q07807 IPL1YPL209C 1104 nt8.63□□□□□ -1.03
PUF3Q07807 EMC3YKL207W 762 nt8.62□□□□□ -1.03
PUF3Q07807 YNR068CYNR068C 819 nt8.62□□□□□ -1.03
PUF3Q07807 PAB1YER165W 1734 nt8.61□□□□□ -1.03
PUF3Q07807 TPN1YGL186C 1740 nt8.61□□□□□ -1.03
PUF3Q07807 FLX1YIL134W 936 nt8.61□□□□□ -1.03 RIP-Chip
PUF3Q07807 YPL041CYPL041C 624 nt8.61□□□□□ -1.03
PUF3Q07807 AAC3YBR085W 924 nt8.61□□□□□ -1.03
PUF3Q07807 MCM5YLR274W 2328 nt8.6□□□□□ -1.03
PUF3Q07807 TRP2YER090W 1524 nt8.6□□□□□ -1.03
PUF3Q07807 FRA1YLL029W 2250 nt8.59□□□□□ -1.03
PUF3Q07807 CYC3YAL039C 810 nt8.59□□□□□ -1.03 RIP-Chip
PUF3Q07807 FET5YFL041W 1869 nt8.59□□□□□ -1.03
PUF3Q07807 THI6YPL214C 1623 nt8.58□□□□□ -1.04
PUF3Q07807 YJL009WYJL009W 327 nt8.58□□□□□ -1.04
PUF3Q07807 YCR025CYCR025C 411 nt8.57□□□□□ -1.04
PUF3Q07807 YFR020WYFR020W 699 nt8.57□□□□□ -1.04
PUF3Q07807 YJL064WYJL064W 396 nt8.57□□□□□ -1.04
PUF3Q07807 TMS1YDR105C 1422 nt8.56□□□□□ -1.04
PUF3Q07807 COG1YGL223C 1254 nt8.56□□□□□ -1.04
PUF3Q07807 YOR072WYOR072W 315 nt8.56□□□□□ -1.04
PUF3Q07807 FTH1YBR207W 1398 nt8.56□□□□□ -1.04
PUF3Q07807 YLR280CYLR280C 351 nt8.55□□□□□ -1.04
PUF3Q07807 URE2YNL229C 1065 nt8.55□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms