Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pfn1P62962 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pfn1P62962 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pfn1P62962 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.47■□□□□ 0.55
Pfn1P62962 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pfn1P62962 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pfn1P62962 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pfn1P62962 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pfn1P62962 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pfn1P62962 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Pfn1P62962 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pfn1P62962 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.45■□□□□ 0.54
Pfn1P62962 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pfn1P62962 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pfn1P62962 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pfn1P62962 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pfn1P62962 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pfn1P62962 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pfn1P62962 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pfn1P62962 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.43■□□□□ 0.54
Pfn1P62962 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pfn1P62962 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pfn1P62962 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pfn1P62962 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pfn1P62962 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.41■□□□□ 0.54
Pfn1P62962 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pfn1P62962 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pfn1P62962 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pfn1P62962 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pfn1P62962 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pfn1P62962 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pfn1P62962 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pfn1P62962 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pfn1P62962 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pfn1P62962 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pfn1P62962 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pfn1P62962 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Pfn1P62962 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pfn1P62962 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pfn1P62962 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pfn1P62962 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pfn1P62962 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pfn1P62962 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pfn1P62962 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pfn1P62962 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Pfn1P62962 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pfn1P62962 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pfn1P62962 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pfn1P62962 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pfn1P62962 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfn1P62962 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfn1P62962 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pfn1P62962 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfn1P62962 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfn1P62962 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pfn1P62962 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.35■□□□□ 0.53
Pfn1P62962 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pfn1P62962 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.34■□□□□ 0.53
Pfn1P62962 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pfn1P62962 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.34■□□□□ 0.53
Pfn1P62962 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pfn1P62962 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pfn1P62962 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pfn1P62962 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pfn1P62962 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pfn1P62962 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.33■□□□□ 0.52
Pfn1P62962 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pfn1P62962 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pfn1P62962 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pfn1P62962 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pfn1P62962 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pfn1P62962 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pfn1P62962 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pfn1P62962 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pfn1P62962 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.31■□□□□ 0.52
Pfn1P62962 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pfn1P62962 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pfn1P62962 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pfn1P62962 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pfn1P62962 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfn1P62962 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfn1P62962 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pfn1P62962 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pfn1P62962 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pfn1P62962 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.28■□□□□ 0.52
Pfn1P62962 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pfn1P62962 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pfn1P62962 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pfn1P62962 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pfn1P62962 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.27■□□□□ 0.52
Pfn1P62962 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pfn1P62962 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pfn1P62962 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pfn1P62962 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pfn1P62962 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pfn1P62962 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pfn1P62962 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pfn1P62962 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pfn1P62962 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pfn1P62962 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms