Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 tA(AGC)FtA(AGC)F 73 nt8.62□□□□□ -1.03
RFX1P48743 tA(AGC)GtA(AGC)G 73 nt8.62□□□□□ -1.03
RFX1P48743 tA(AGC)HtA(AGC)H 73 nt8.62□□□□□ -1.03
RFX1P48743 tA(AGC)JtA(AGC)J 73 nt8.62□□□□□ -1.03
RFX1P48743 tA(AGC)K1tA(AGC)K1 73 nt8.62□□□□□ -1.03
RFX1P48743 tA(AGC)K2tA(AGC)K2 73 nt8.62□□□□□ -1.03
RFX1P48743 tA(AGC)LtA(AGC)L 73 nt8.62□□□□□ -1.03
RFX1P48743 tA(AGC)M1tA(AGC)M1 73 nt8.62□□□□□ -1.03
RFX1P48743 tA(AGC)M2tA(AGC)M2 73 nt8.62□□□□□ -1.03
RFX1P48743 tA(AGC)PtA(AGC)P 73 nt8.62□□□□□ -1.03
RFX1P48743 ADH3YMR083W 1128 nt8.62□□□□□ -1.03
RFX1P48743 PAU19YMR325W 375 nt8.62□□□□□ -1.03
RFX1P48743 PHB2YGR231C 933 nt8.61□□□□□ -1.03
RFX1P48743 REX2YLR059C 810 nt8.61□□□□□ -1.03
RFX1P48743 SAN1YDR143C 1833 nt8.61□□□□□ -1.03
RFX1P48743 MOB1YIL106W 945 nt8.6□□□□□ -1.03
RFX1P48743 IPL1YPL209C 1104 nt8.6□□□□□ -1.03
RFX1P48743 CSM2YIL132C 642 nt8.59□□□□□ -1.03
RFX1P48743 SBP1YHL034C 885 nt8.57□□□□□ -1.04
RFX1P48743 LEU4YNL104C 1860 nt8.57□□□□□ -1.04
RFX1P48743 SDS24YBR214W 1584 nt8.56□□□□□ -1.04
RFX1P48743 FLX1YIL134W 936 nt8.56□□□□□ -1.04
RFX1P48743 PUP1YOR157C 786 nt8.56□□□□□ -1.04
RFX1P48743 YCR025CYCR025C 411 nt8.55□□□□□ -1.04
RFX1P48743 YDR467CYDR467C 327 nt8.55□□□□□ -1.04
RFX1P48743 GAS1YMR307W 1680 nt8.53□□□□□ -1.04
RFX1P48743 VBA3YCL069W 1377 nt8.53□□□□□ -1.04
RFX1P48743 PTC6YCR079W 1329 nt8.53□□□□□ -1.04
RFX1P48743 ENO1YGR254W 1314 nt8.53□□□□□ -1.04
RFX1P48743 INH1YDL181W 258 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)BtD(GUC)B 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)DtD(GUC)D 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)G1tD(GUC)G1 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)G2tD(GUC)G2 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)I1tD(GUC)I1 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)I2tD(GUC)I2 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)J1tD(GUC)J1 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)J2tD(GUC)J2 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)J3tD(GUC)J3 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)J4tD(GUC)J4 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)KtD(GUC)K 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)L1tD(GUC)L1 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)L2tD(GUC)L2 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)MtD(GUC)M 72 nt8.52□□□□□ -1.05
RFX1P48743 tD(GUC)OtD(GUC)O 72 nt8.52□□□□□ -1.05
RFX1P48743 YPT11YNL304W 1254 nt8.52□□□□□ -1.05
RFX1P48743 MIM1YOL026C 342 nt8.52□□□□□ -1.05
RFX1P48743 YRF1-2YER190W 5046 nt8.51□□□□□ -1.05
RFX1P48743 GPM1YKL152C 744 nt8.51□□□□□ -1.05
RFX1P48743 ILV2YMR108W 2064 nt8.5□□□□□ -1.05
RFX1P48743 CYC3YAL039C 810 nt8.5□□□□□ -1.05
RFX1P48743 GGA2YHR108W 1758 nt8.5□□□□□ -1.05
RFX1P48743 Q0010Q0010 387 nt8.49□□□□□ -1.05
RFX1P48743 THI3YDL080C 1830 nt8.49□□□□□ -1.05
RFX1P48743 SLG1YOR008C 1137 nt8.48□□□□□ -1.05
RFX1P48743 FET5YFL041W 1869 nt8.48□□□□□ -1.05
RFX1P48743 GAL2YLR081W 1725 nt8.47□□□□□ -1.05
RFX1P48743 UFD1YGR048W 1086 nt8.47□□□□□ -1.05
RFX1P48743 YJR154WYJR154W 1041 nt8.47□□□□□ -1.05
RFX1P48743 tE(CUC)DtE(CUC)D 72 nt8.46□□□□□ -1.06
RFX1P48743 tE(CUC)ItE(CUC)I 72 nt8.46□□□□□ -1.06
RFX1P48743 YLR280CYLR280C 351 nt8.46□□□□□ -1.06
RFX1P48743 YMR316C-BYMR316C-B 309 nt8.46□□□□□ -1.06
RFX1P48743 FIT1YDR534C 1587 nt8.46□□□□□ -1.06
RFX1P48743 HBS1YKR084C 1836 nt8.45□□□□□ -1.06
RFX1P48743 LYS20YDL182W 1287 nt8.45□□□□□ -1.06
RFX1P48743 YFR020WYFR020W 699 nt8.44□□□□□ -1.06
RFX1P48743 RSM7YJR113C 744 nt8.44□□□□□ -1.06
RFX1P48743 ESBP6YNL125C 2022 nt8.44□□□□□ -1.06
RFX1P48743 NPP2YEL016C 1482 nt8.44□□□□□ -1.06
RFX1P48743 SER2YGR208W 930 nt8.43□□□□□ -1.06
RFX1P48743 YBL095WYBL095W 813 nt8.43□□□□□ -1.06
RFX1P48743 YMC2YBR104W 990 nt8.43□□□□□ -1.06
RFX1P48743 SRP102YKL154W 735 nt8.42□□□□□ -1.06
RFX1P48743 ERO1YML130C 1692 nt8.41□□□□□ -1.06
RFX1P48743 DUR3YHL016C 2208 nt8.41□□□□□ -1.06
RFX1P48743 SAM50YNL026W 1455 nt8.39□□□□□ -1.07
RFX1P48743 LPD1YFL018C 1500 nt8.39□□□□□ -1.07
RFX1P48743 HTS1YPR033C 1641 nt8.38□□□□□ -1.07
RFX1P48743 DUS3YLR401C 2007 nt8.37□□□□□ -1.07
RFX1P48743 YCP4YCR004C 744 nt8.37□□□□□ -1.07
RFX1P48743 TGA1tA(UGC)A 73 nt8.37□□□□□ -1.07
RFX1P48743 tA(UGC)EtA(UGC)E 73 nt8.37□□□□□ -1.07
RFX1P48743 tA(UGC)GtA(UGC)G 73 nt8.37□□□□□ -1.07
RFX1P48743 tA(UGC)LtA(UGC)L 73 nt8.37□□□□□ -1.07
RFX1P48743 tA(UGC)OtA(UGC)O 73 nt8.37□□□□□ -1.07
RFX1P48743 YGR210CYGR210C 1236 nt8.37□□□□□ -1.07
RFX1P48743 MRS4YKR052C 915 nt8.37□□□□□ -1.07
RFX1P48743 TOK1YJL093C 2076 nt8.36□□□□□ -1.07
RFX1P48743 AAC3YBR085W 924 nt8.35□□□□□ -1.07
RFX1P48743 AAT1YKL106W 1356 nt8.35□□□□□ -1.07
RFX1P48743 YLR460CYLR460C 1131 nt8.34□□□□□ -1.07
RFX1P48743 FCY1YPR062W 477 nt8.33□□□□□ -1.08
RFX1P48743 TMS1YDR105C 1422 nt8.32□□□□□ -1.08
RFX1P48743 SWM1YDR260C 513 nt8.32□□□□□ -1.08
RFX1P48743 TPN1YGL186C 1740 nt8.32□□□□□ -1.08
RFX1P48743 YJR149WYJR149W 1215 nt8.31□□□□□ -1.08
RFX1P48743 YJL009WYJL009W 327 nt8.3□□□□□ -1.08
RFX1P48743 ORT1YOR130C 879 nt8.3□□□□□ -1.08
RFX1P48743 POP2YNR052C 1302 nt8.29□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 52.4 ms