Protein–RNA interactions for Protein: P48561

TRF5, Poly(A) RNA polymerase protein 1, yeastyeast

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRF5P48561 tA(AGC)PtA(AGC)P 73 nt8.62□□□□□ -1.03
TRF5P48561 RIM2YBR192W 1134 nt8.62□□□□□ -1.03
TRF5P48561 ENO2YHR174W 1314 nt8.61□□□□□ -1.03
TRF5P48561 PHB2YGR231C 933 nt8.61□□□□□ -1.03
TRF5P48561 SPE2YOL052C 1191 nt8.61□□□□□ -1.03
TRF5P48561 HAP5YOR358W 729 nt8.61□□□□□ -1.03
TRF5P48561 MET1YKR069W 1782 nt8.61□□□□□ -1.03
TRF5P48561 SLG1YOR008C 1137 nt8.6□□□□□ -1.03
TRF5P48561 IPL1YPL209C 1104 nt8.6□□□□□ -1.03
TRF5P48561 YDR510C-AYDR510C-A 117 nt8.59□□□□□ -1.03
TRF5P48561 KRE1YNL322C 942 nt8.59□□□□□ -1.03
TRF5P48561 LEU2YCL018W 1095 nt8.59□□□□□ -1.03
TRF5P48561 AGP3YFL055W 1677 nt8.59□□□□□ -1.03
TRF5P48561 FLX1YIL134W 936 nt8.58□□□□□ -1.04
TRF5P48561 ADH3YMR083W 1128 nt8.58□□□□□ -1.04
TRF5P48561 CRC1YOR100C 984 nt8.58□□□□□ -1.04
TRF5P48561 MEX67YPL169C 1800 nt8.57□□□□□ -1.04
TRF5P48561 NAM8YHR086W 1572 nt8.56□□□□□ -1.04
TRF5P48561 INH1YDL181W 258 nt8.56□□□□□ -1.04
TRF5P48561 DPL1YDR294C 1770 nt8.56□□□□□ -1.04
TRF5P48561 YKL053WYKL053W 375 nt8.55□□□□□ -1.04
TRF5P48561 snR31snR31 225 nt8.55□□□□□ -1.04
TRF5P48561 TOM71YHR117W 1920 nt8.54□□□□□ -1.04
TRF5P48561 RPN14YGL004C 1254 nt8.54□□□□□ -1.04
TRF5P48561 GNP1YDR508C 1992 nt8.53□□□□□ -1.04
TRF5P48561 YLR173WYLR173W 1827 nt8.53□□□□□ -1.04
TRF5P48561 SAN1YDR143C 1833 nt8.52□□□□□ -1.04
TRF5P48561 REX2YLR059C 810 nt8.52□□□□□ -1.05
TRF5P48561 SDS24YBR214W 1584 nt8.52□□□□□ -1.05
TRF5P48561 NBA1YOL070C 1506 nt8.51□□□□□ -1.05
TRF5P48561 TPN1YGL186C 1740 nt8.51□□□□□ -1.05
TRF5P48561 LEU4YNL104C 1860 nt8.51□□□□□ -1.05
TRF5P48561 YKR012CYKR012C 378 nt8.5□□□□□ -1.05
TRF5P48561 VBA3YCL069W 1377 nt8.49□□□□□ -1.05
TRF5P48561 YCR025CYCR025C 411 nt8.49□□□□□ -1.05
TRF5P48561 SWM1YDR260C 513 nt8.49□□□□□ -1.05
TRF5P48561 MDL2YPL270W 2322 nt8.48□□□□□ -1.05
TRF5P48561 KGD2YDR148C 1392 nt8.48□□□□□ -1.05
TRF5P48561 SRP54YPR088C 1626 nt8.47□□□□□ -1.05
TRF5P48561 YCP4YCR004C 744 nt8.47□□□□□ -1.05
TRF5P48561 LYS20YDL182W 1287 nt8.46□□□□□ -1.06
TRF5P48561 YDR467CYDR467C 327 nt8.46□□□□□ -1.06
TRF5P48561 MOB1YIL106W 945 nt8.46□□□□□ -1.06
TRF5P48561 CYC3YAL039C 810 nt8.45□□□□□ -1.06
TRF5P48561 SER2YGR208W 930 nt8.44□□□□□ -1.06
TRF5P48561 SAM50YNL026W 1455 nt8.44□□□□□ -1.06
TRF5P48561 tE(CUC)DtE(CUC)D 72 nt8.43□□□□□ -1.06
TRF5P48561 tE(CUC)ItE(CUC)I 72 nt8.43□□□□□ -1.06
TRF5P48561 SRP102YKL154W 735 nt8.43□□□□□ -1.06
TRF5P48561 RTG2YGL252C 1767 nt8.43□□□□□ -1.06
TRF5P48561 NPP2YEL016C 1482 nt8.42□□□□□ -1.06
TRF5P48561 MTO1YGL236C 2010 nt8.42□□□□□ -1.06
TRF5P48561 ENO1YGR254W 1314 nt8.41□□□□□ -1.06
TRF5P48561 YPT11YNL304W 1254 nt8.4□□□□□ -1.06
TRF5P48561 MIM1YOL026C 342 nt8.4□□□□□ -1.06
TRF5P48561 YFR020WYFR020W 699 nt8.39□□□□□ -1.07
TRF5P48561 SBP1YHL034C 885 nt8.39□□□□□ -1.07
TRF5P48561 tD(GUC)BtD(GUC)B 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)DtD(GUC)D 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)G1tD(GUC)G1 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)G2tD(GUC)G2 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)I1tD(GUC)I1 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)I2tD(GUC)I2 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)J1tD(GUC)J1 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)J2tD(GUC)J2 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)J3tD(GUC)J3 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)J4tD(GUC)J4 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)KtD(GUC)K 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)L1tD(GUC)L1 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)L2tD(GUC)L2 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)MtD(GUC)M 72 nt8.38□□□□□ -1.07
TRF5P48561 tD(GUC)OtD(GUC)O 72 nt8.38□□□□□ -1.07
TRF5P48561 HTS1YPR033C 1641 nt8.37□□□□□ -1.07
TRF5P48561 GPM1YKL152C 744 nt8.37□□□□□ -1.07
TRF5P48561 ERO1YML130C 1692 nt8.37□□□□□ -1.07
TRF5P48561 GAS1YMR307W 1680 nt8.37□□□□□ -1.07
TRF5P48561 THI6YPL214C 1623 nt8.36□□□□□ -1.07
TRF5P48561 YLR280CYLR280C 351 nt8.36□□□□□ -1.07
TRF5P48561 YMR316C-BYMR316C-B 309 nt8.36□□□□□ -1.07
TRF5P48561 YBL095WYBL095W 813 nt8.36□□□□□ -1.07
TRF5P48561 SNU66YOR308C 1764 nt8.35□□□□□ -1.07
TRF5P48561 FET5YFL041W 1869 nt8.35□□□□□ -1.07
TRF5P48561 YIA6YIL006W 1122 nt8.35□□□□□ -1.07
TRF5P48561 THI3YDL080C 1830 nt8.35□□□□□ -1.07
TRF5P48561 PTC6YCR079W 1329 nt8.34□□□□□ -1.07
TRF5P48561 YDR306CYDR306C 1437 nt8.34□□□□□ -1.07
TRF5P48561 ADE2YOR128C 1716 nt8.34□□□□□ -1.07
TRF5P48561 UFD1YGR048W 1086 nt8.33□□□□□ -1.08
TRF5P48561 YGR210CYGR210C 1236 nt8.33□□□□□ -1.08
TRF5P48561 RIB1YBL033C 1038 nt8.33□□□□□ -1.08
TRF5P48561 YIL177CYIL177C 5277 nt8.33□□□□□ -1.08
TRF5P48561 GGA2YHR108W 1758 nt8.31□□□□□ -1.08
TRF5P48561 YMC2YBR104W 990 nt8.31□□□□□ -1.08
TRF5P48561 YRF1-3YGR296W 5580 nt8.3□□□□□ -1.08
TRF5P48561 YRF1-6YNL339C 5580 nt8.3□□□□□ -1.08
TRF5P48561 YRF1-7YPL283C 5580 nt8.3□□□□□ -1.08
TRF5P48561 TGA1tA(UGC)A 73 nt8.3□□□□□ -1.08
TRF5P48561 tA(UGC)EtA(UGC)E 73 nt8.3□□□□□ -1.08
TRF5P48561 tA(UGC)GtA(UGC)G 73 nt8.3□□□□□ -1.08
TRF5P48561 tA(UGC)LtA(UGC)L 73 nt8.3□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms