Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.21■□□□□ 0.83
Hist1h1dP43277 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hist1h1dP43277 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hist1h1dP43277 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Hist1h1dP43277 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.19■□□□□ 0.82
Hist1h1dP43277 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hist1h1dP43277 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Hist1h1dP43277 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Hist1h1dP43277 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Hist1h1dP43277 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.17■□□□□ 0.82
Hist1h1dP43277 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hist1h1dP43277 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hist1h1dP43277 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hist1h1dP43277 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hist1h1dP43277 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Hist1h1dP43277 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hist1h1dP43277 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hist1h1dP43277 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hist1h1dP43277 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hist1h1dP43277 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hist1h1dP43277 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hist1h1dP43277 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h1dP43277 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h1dP43277 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h1dP43277 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h1dP43277 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hist1h1dP43277 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h1dP43277 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h1dP43277 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Hist1h1dP43277 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.1■□□□□ 0.81
Hist1h1dP43277 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Hist1h1dP43277 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hist1h1dP43277 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hist1h1dP43277 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hist1h1dP43277 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hist1h1dP43277 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hist1h1dP43277 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hist1h1dP43277 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Hist1h1dP43277 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h1dP43277 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h1dP43277 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h1dP43277 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h1dP43277 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Hist1h1dP43277 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h1dP43277 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hist1h1dP43277 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h1dP43277 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hist1h1dP43277 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hist1h1dP43277 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hist1h1dP43277 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hist1h1dP43277 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hist1h1dP43277 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hist1h1dP43277 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hist1h1dP43277 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Hist1h1dP43277 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hist1h1dP43277 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hist1h1dP43277 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hist1h1dP43277 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hist1h1dP43277 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hist1h1dP43277 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hist1h1dP43277 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hist1h1dP43277 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hist1h1dP43277 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hist1h1dP43277 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h1dP43277 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h1dP43277 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h1dP43277 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h1dP43277 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hist1h1dP43277 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hist1h1dP43277 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h1dP43277 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Hist1h1dP43277 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Hist1h1dP43277 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h1dP43277 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.97■□□□□ 0.79
Hist1h1dP43277 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h1dP43277 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hist1h1dP43277 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Hist1h1dP43277 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Hist1h1dP43277 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hist1h1dP43277 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.96■□□□□ 0.79
Hist1h1dP43277 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hist1h1dP43277 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.95■□□□□ 0.78
Hist1h1dP43277 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hist1h1dP43277 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.94■□□□□ 0.78
Hist1h1dP43277 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hist1h1dP43277 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hist1h1dP43277 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hist1h1dP43277 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.93■□□□□ 0.78
Hist1h1dP43277 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hist1h1dP43277 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hist1h1dP43277 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hist1h1dP43277 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hist1h1dP43277 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hist1h1dP43277 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hist1h1dP43277 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hist1h1dP43277 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Hist1h1dP43277 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.9■□□□□ 0.78
Hist1h1dP43277 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.9■□□□□ 0.78
Hist1h1dP43277 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hist1h1dP43277 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms