Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 ODC1YPL134C 933 nt7.38□□□□□ -1.23
CDC39P25655 ACO2YJL200C 2370 nt7.38□□□□□ -1.23
CDC39P25655 KEL3YPL263C 1956 nt7.37□□□□□ -1.23
CDC39P25655 HAP5YOR358W 729 nt7.37□□□□□ -1.23
CDC39P25655 AMF1YOR378W 1548 nt7.36□□□□□ -1.23
CDC39P25655 HTS1YPR033C 1641 nt7.36□□□□□ -1.23
CDC39P25655 CYT1YOR065W 930 nt7.36□□□□□ -1.23
CDC39P25655 YMR316C-BYMR316C-B 309 nt7.36□□□□□ -1.23
CDC39P25655 ENO1YGR254W 1314 nt7.36□□□□□ -1.23
CDC39P25655 MFG1YDL233W 1377 nt7.36□□□□□ -1.23
CDC39P25655 SFP1YLR403W 2052 nt7.36□□□□□ -1.23
CDC39P25655 RRT8YOL048C 1029 nt7.35□□□□□ -1.23
CDC39P25655 YMR265CYMR265C 1386 nt7.34□□□□□ -1.23
CDC39P25655 PAU21YOR394W 495 nt7.34□□□□□ -1.23
CDC39P25655 PAU22YPL282C 495 nt7.34□□□□□ -1.23
CDC39P25655 YJL160CYJL160C 864 nt7.33□□□□□ -1.24
CDC39P25655 EMC3YKL207W 762 nt7.33□□□□□ -1.24
CDC39P25655 LEU2YCL018W 1095 nt7.33□□□□□ -1.24
CDC39P25655 TVP23YDR084C 600 nt7.33□□□□□ -1.24
CDC39P25655 RPC31YNL151C 756 nt7.33□□□□□ -1.24
CDC39P25655 PET18YCR020C 648 nt7.32□□□□□ -1.24
CDC39P25655 SER2YGR208W 930 nt7.32□□□□□ -1.24
CDC39P25655 PSD1YNL169C 1503 nt7.31□□□□□ -1.24
CDC39P25655 KAE1YKR038C 1161 nt7.3□□□□□ -1.24
CDC39P25655 FCY1YPR062W 477 nt7.3□□□□□ -1.24
CDC39P25655 snR31snR31 225 nt7.3□□□□□ -1.24
CDC39P25655 TPC1YGR096W 945 nt7.29□□□□□ -1.24
CDC39P25655 MET1YKR069W 1782 nt7.29□□□□□ -1.24
CDC39P25655 tL(UAA)B1tL(UAA)B1 84 nt7.28□□□□□ -1.24
CDC39P25655 tL(UAA)B2tL(UAA)B2 84 nt7.28□□□□□ -1.24
CDC39P25655 tL(UAA)DtL(UAA)D 84 nt7.28□□□□□ -1.24
CDC39P25655 SUP51tL(UAA)J 84 nt7.28□□□□□ -1.24
CDC39P25655 tL(UAA)KtL(UAA)K 84 nt7.28□□□□□ -1.24
CDC39P25655 tL(UAA)LtL(UAA)L 84 nt7.28□□□□□ -1.24
CDC39P25655 tL(UAA)NtL(UAA)N 84 nt7.28□□□□□ -1.24
CDC39P25655 YAL016C-AYAL016C-A 315 nt7.28□□□□□ -1.24
CDC39P25655 LSP1YPL004C 1026 nt7.28□□□□□ -1.24
CDC39P25655 YKL053WYKL053W 375 nt7.27□□□□□ -1.25
CDC39P25655 LEU4YNL104C 1860 nt7.27□□□□□ -1.25
CDC39P25655 RPN14YGL004C 1254 nt7.27□□□□□ -1.25
CDC39P25655 DPL1YDR294C 1770 nt7.26□□□□□ -1.25
CDC39P25655 ELP4YPL101W 1371 nt7.26□□□□□ -1.25
CDC39P25655 CRC1YOR100C 984 nt7.26□□□□□ -1.25
CDC39P25655 SRP54YPR088C 1626 nt7.26□□□□□ -1.25
CDC39P25655 YHL008CYHL008C 1884 nt7.26□□□□□ -1.25
CDC39P25655 CYC3YAL039C 810 nt7.25□□□□□ -1.25
CDC39P25655 YMR206WYMR206W 942 nt7.25□□□□□ -1.25
CDC39P25655 AGP3YFL055W 1677 nt7.25□□□□□ -1.25
CDC39P25655 YGR210CYGR210C 1236 nt7.25□□□□□ -1.25
CDC39P25655 PRE5YMR314W 705 nt7.24□□□□□ -1.25
CDC39P25655 ERO1YML130C 1692 nt7.24□□□□□ -1.25
CDC39P25655 DMA2YNL116W 1569 nt7.24□□□□□ -1.25
CDC39P25655 YPL108WYPL108W 507 nt7.24□□□□□ -1.25
CDC39P25655 THI3YDL080C 1830 nt7.24□□□□□ -1.25
CDC39P25655 NPP1YCR026C 2229 nt7.23□□□□□ -1.25
CDC39P25655 HXT10YFL011W 1641 nt7.23□□□□□ -1.25
CDC39P25655 YLR280CYLR280C 351 nt7.22□□□□□ -1.25
CDC39P25655 PTC6YCR079W 1329 nt7.22□□□□□ -1.25
CDC39P25655 UTR5YEL035C 501 nt7.21□□□□□ -1.25
CDC39P25655 YHR218WYHR218W 1812 nt7.2□□□□□ -1.26
CDC39P25655 HRA1HRA1 564 nt7.2□□□□□ -1.26
CDC39P25655 GPM1YKL152C 744 nt7.2□□□□□ -1.26
CDC39P25655 KGD2YDR148C 1392 nt7.19□□□□□ -1.26
CDC39P25655 YKR012CYKR012C 378 nt7.18□□□□□ -1.26
CDC39P25655 YMC2YBR104W 990 nt7.17□□□□□ -1.26
CDC39P25655 SAN1YDR143C 1833 nt7.17□□□□□ -1.26
CDC39P25655 YJR149WYJR149W 1215 nt7.16□□□□□ -1.26
CDC39P25655 MRS4YKR052C 915 nt7.16□□□□□ -1.26
CDC39P25655 YPT11YNL304W 1254 nt7.16□□□□□ -1.26
CDC39P25655 ADA2YDR448W 1305 nt7.16□□□□□ -1.26
CDC39P25655 YMR166CYMR166C 1107 nt7.13□□□□□ -1.27
CDC39P25655 SBP1YHL034C 885 nt7.13□□□□□ -1.27
CDC39P25655 TOS1YBR162C 1368 nt7.13□□□□□ -1.27
CDC39P25655 ADE1YAR015W 921 nt7.12□□□□□ -1.27
CDC39P25655 MET22YOL064C 1074 nt7.12□□□□□ -1.27
CDC39P25655 GAS1YMR307W 1680 nt7.12□□□□□ -1.27
CDC39P25655 FUS3YBL016W 1062 nt7.11□□□□□ -1.27
CDC39P25655 AAC3YBR085W 924 nt7.11□□□□□ -1.27
CDC39P25655 MTO1YGL236C 2010 nt7.11□□□□□ -1.27
CDC39P25655 NPP2YEL016C 1482 nt7.11□□□□□ -1.27
CDC39P25655 YOR072WYOR072W 315 nt7.1□□□□□ -1.27
CDC39P25655 FET5YFL041W 1869 nt7.09□□□□□ -1.27
CDC39P25655 GGA2YHR108W 1758 nt7.09□□□□□ -1.27
CDC39P25655 YPL247CYPL247C 1572 nt7.09□□□□□ -1.27
CDC39P25655 EDC2YER035W 438 nt7.08□□□□□ -1.28
CDC39P25655 tE(CUC)DtE(CUC)D 72 nt7.07□□□□□ -1.28
CDC39P25655 tE(CUC)ItE(CUC)I 72 nt7.07□□□□□ -1.28
CDC39P25655 YDR467CYDR467C 327 nt7.07□□□□□ -1.28
CDC39P25655 INH1YDL181W 258 nt7.05□□□□□ -1.28
CDC39P25655 MIM1YOL026C 342 nt7.04□□□□□ -1.28
CDC39P25655 YER156CYER156C 1017 nt7.04□□□□□ -1.28
CDC39P25655 YLR072WYLR072W 2082 nt7.03□□□□□ -1.28
CDC39P25655 YBL095WYBL095W 813 nt7.03□□□□□ -1.28
CDC39P25655 TPN1YGL186C 1740 nt7.03□□□□□ -1.28
CDC39P25655 SDH8YBR269C 417 nt7.03□□□□□ -1.28
CDC39P25655 NBA1YOL070C 1506 nt7.02□□□□□ -1.29
CDC39P25655 MRP1YDR347W 966 nt7.01□□□□□ -1.29
CDC39P25655 Q0182Q0182 405 nt7□□□□□ -1.29
CDC39P25655 RRT14YIL127C 621 nt7□□□□□ -1.29
CDC39P25655 NUP53YMR153W 1428 nt7□□□□□ -1.29
Retrieved 100 of 7,029 protein–RNA pairs in 44.9 ms