Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Pde6bP23440 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
Pde6bP23440 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pde6bP23440 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Pde6bP23440 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Pde6bP23440 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Pde6bP23440 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pde6bP23440 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Pde6bP23440 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pde6bP23440 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Pde6bP23440 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pde6bP23440 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Pde6bP23440 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26■■□□□ 1.75
Pde6bP23440 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
Pde6bP23440 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Pde6bP23440 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Pde6bP23440 Gm30023-201ENSMUST00000197970 889 ntBASIC25.99■■□□□ 1.75
Pde6bP23440 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.99■■□□□ 1.75
Pde6bP23440 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Pde6bP23440 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pde6bP23440 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.98■■□□□ 1.75
Pde6bP23440 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pde6bP23440 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pde6bP23440 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
Pde6bP23440 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pde6bP23440 Mir6538-201ENSMUST00000183713 110 ntBASIC25.95■■□□□ 1.74
Pde6bP23440 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Pde6bP23440 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pde6bP23440 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Pde6bP23440 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.94■■□□□ 1.74
Pde6bP23440 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Pde6bP23440 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.94■■□□□ 1.74
Pde6bP23440 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Pde6bP23440 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pde6bP23440 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pde6bP23440 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Pde6bP23440 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.93■■□□□ 1.74
Pde6bP23440 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Pde6bP23440 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Pde6bP23440 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Pde6bP23440 Particl-201ENSMUST00000205370 1560 ntBASIC25.93■■□□□ 1.74
Pde6bP23440 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Pde6bP23440 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Pde6bP23440 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Pde6bP23440 Gm11175-201ENSMUST00000116172 543 ntBASIC25.9■■□□□ 1.74
Pde6bP23440 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.89■■□□□ 1.74
Pde6bP23440 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pde6bP23440 Gm6311-201ENSMUST00000073790 878 ntBASIC25.88■■□□□ 1.73
Pde6bP23440 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.87■■□□□ 1.73
Pde6bP23440 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pde6bP23440 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.84■■□□□ 1.73
Pde6bP23440 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pde6bP23440 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pde6bP23440 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Pde6bP23440 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Pde6bP23440 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Pde6bP23440 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Pde6bP23440 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pde6bP23440 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Pde6bP23440 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
Pde6bP23440 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pde6bP23440 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pde6bP23440 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pde6bP23440 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pde6bP23440 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Pde6bP23440 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Pde6bP23440 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pde6bP23440 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pde6bP23440 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Pde6bP23440 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.79■■□□□ 1.72
Pde6bP23440 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pde6bP23440 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Pde6bP23440 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.78■■□□□ 1.72
Pde6bP23440 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Pde6bP23440 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pde6bP23440 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pde6bP23440 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pde6bP23440 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
Pde6bP23440 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pde6bP23440 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pde6bP23440 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.72■■□□□ 1.71
Pde6bP23440 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.72■■□□□ 1.71
Pde6bP23440 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.72■■□□□ 1.71
Pde6bP23440 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Pde6bP23440 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pde6bP23440 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
Pde6bP23440 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Pde6bP23440 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pde6bP23440 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Pde6bP23440 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Pde6bP23440 Cap2-205ENSMUST00000225824 1634 ntBASIC25.68■■□□□ 1.7
Pde6bP23440 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Pde6bP23440 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pde6bP23440 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pde6bP23440 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pde6bP23440 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Pde6bP23440 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pde6bP23440 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.65■■□□□ 1.7
Pde6bP23440 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pde6bP23440 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms