Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 YKR012CYKR012C 378 nt9.53□□□□□ -0.88
HCA4P20448 VBA3YCL069W 1377 nt9.52□□□□□ -0.88
HCA4P20448 BSP1YPR171W 1731 nt9.51□□□□□ -0.89
HCA4P20448 YHR218WYHR218W 1812 nt9.51□□□□□ -0.89
HCA4P20448 GID7YCL039W 2238 nt9.48□□□□□ -0.89
HCA4P20448 LEU4YNL104C 1860 nt9.48□□□□□ -0.89
HCA4P20448 HXT10YFL011W 1641 nt9.47□□□□□ -0.89
HCA4P20448 MOB1YIL106W 945 nt9.47□□□□□ -0.89
HCA4P20448 SBP1YHL034C 885 nt9.46□□□□□ -0.9
HCA4P20448 YMR316C-BYMR316C-B 309 nt9.46□□□□□ -0.9
HCA4P20448 THI3YDL080C 1830 nt9.46□□□□□ -0.9
HCA4P20448 YPT11YNL304W 1254 nt9.44□□□□□ -0.9
HCA4P20448 YRF1-2YER190W 5046 nt9.44□□□□□ -0.9
HCA4P20448 YCR025CYCR025C 411 nt9.43□□□□□ -0.9
HCA4P20448 GAS1YMR307W 1680 nt9.42□□□□□ -0.9
HCA4P20448 PSD1YNL169C 1503 nt9.42□□□□□ -0.9
HCA4P20448 tE(CUC)DtE(CUC)D 72 nt9.42□□□□□ -0.9
HCA4P20448 tE(CUC)ItE(CUC)I 72 nt9.42□□□□□ -0.9
HCA4P20448 CYC3YAL039C 810 nt9.42□□□□□ -0.9
HCA4P20448 AGP3YFL055W 1677 nt9.42□□□□□ -0.9
HCA4P20448 PTC6YCR079W 1329 nt9.41□□□□□ -0.9
HCA4P20448 ENO1YGR254W 1314 nt9.41□□□□□ -0.9
HCA4P20448 YFR020WYFR020W 699 nt9.41□□□□□ -0.9
HCA4P20448 GGA2YHR108W 1758 nt9.4□□□□□ -0.9
HCA4P20448 LYS20YDL182W 1287 nt9.4□□□□□ -0.9
HCA4P20448 SWM1YDR260C 513 nt9.4□□□□□ -0.9
HCA4P20448 GPM1YKL152C 744 nt9.4□□□□□ -0.9
HCA4P20448 SRP102YKL154W 735 nt9.4□□□□□ -0.9
HCA4P20448 SER2YGR208W 930 nt9.38□□□□□ -0.91
HCA4P20448 YDR467CYDR467C 327 nt9.37□□□□□ -0.91
HCA4P20448 YCP4YCR004C 744 nt9.36□□□□□ -0.91
HCA4P20448 Q0010Q0010 387 nt9.36□□□□□ -0.91
HCA4P20448 URA8YJR103W 1737 nt9.35□□□□□ -0.91
HCA4P20448 ERO1YML130C 1692 nt9.35□□□□□ -0.91
HCA4P20448 INH1YDL181W 258 nt9.34□□□□□ -0.91
HCA4P20448 YLR280CYLR280C 351 nt9.34□□□□□ -0.91
HCA4P20448 CYT1YOR065W 930 nt9.34□□□□□ -0.91
HCA4P20448 NPP2YEL016C 1482 nt9.34□□□□□ -0.91
HCA4P20448 SAM50YNL026W 1455 nt9.34□□□□□ -0.91
HCA4P20448 HTS1YPR033C 1641 nt9.31□□□□□ -0.92
HCA4P20448 AAC3YBR085W 924 nt9.31□□□□□ -0.92
HCA4P20448 MET8YBR213W 825 nt9.31□□□□□ -0.92
HCA4P20448 YBL095WYBL095W 813 nt9.3□□□□□ -0.92
HCA4P20448 YHL008CYHL008C 1884 nt9.3□□□□□ -0.92
HCA4P20448 YGR210CYGR210C 1236 nt9.29□□□□□ -0.92
HCA4P20448 YJR154WYJR154W 1041 nt9.29□□□□□ -0.92
HCA4P20448 RSM7YJR113C 744 nt9.28□□□□□ -0.92
HCA4P20448 RIB1YBL033C 1038 nt9.28□□□□□ -0.92
HCA4P20448 ERG6YML008C 1152 nt9.27□□□□□ -0.93
HCA4P20448 SOD2YHR008C 702 nt9.26□□□□□ -0.93
HCA4P20448 TMS1YDR105C 1422 nt9.25□□□□□ -0.93
HCA4P20448 TGA1tA(UGC)A 73 nt9.25□□□□□ -0.93
HCA4P20448 tA(UGC)EtA(UGC)E 73 nt9.25□□□□□ -0.93
HCA4P20448 tA(UGC)GtA(UGC)G 73 nt9.25□□□□□ -0.93
HCA4P20448 tA(UGC)LtA(UGC)L 73 nt9.25□□□□□ -0.93
HCA4P20448 tA(UGC)OtA(UGC)O 73 nt9.25□□□□□ -0.93
HCA4P20448 YIA6YIL006W 1122 nt9.25□□□□□ -0.93
HCA4P20448 YPL108WYPL108W 507 nt9.24□□□□□ -0.93
HCA4P20448 FET5YFL041W 1869 nt9.23□□□□□ -0.93
HCA4P20448 ESBP6YNL125C 2022 nt9.23□□□□□ -0.93
HCA4P20448 YDR510C-AYDR510C-A 117 nt9.22□□□□□ -0.93
HCA4P20448 RNA170RNA170 169 nt9.22□□□□□ -0.93
HCA4P20448 MET22YOL064C 1074 nt9.21□□□□□ -0.94
HCA4P20448 YMC2YBR104W 990 nt9.21□□□□□ -0.94
HCA4P20448 YLR072WYLR072W 2082 nt9.2□□□□□ -0.94
HCA4P20448 GTB1YDR221W 2109 nt9.2□□□□□ -0.94
HCA4P20448 HXK1YFR053C 1458 nt9.2□□□□□ -0.94
HCA4P20448 MTO1YGL236C 2010 nt9.19□□□□□ -0.94
HCA4P20448 MRS4YKR052C 915 nt9.19□□□□□ -0.94
HCA4P20448 YMR166CYMR166C 1107 nt9.19□□□□□ -0.94
HCA4P20448 AAT1YKL106W 1356 nt9.19□□□□□ -0.94
HCA4P20448 YIR035CYIR035C 765 nt9.18□□□□□ -0.94
HCA4P20448 YMR007WYMR007W 381 nt9.18□□□□□ -0.94
HCA4P20448 NBA1YOL070C 1506 nt9.18□□□□□ -0.94
HCA4P20448 YBR056WYBR056W 1506 nt9.18□□□□□ -0.94
HCA4P20448 TPN1YGL186C 1740 nt9.17□□□□□ -0.94
HCA4P20448 OCH1YGL038C 1443 nt9.16□□□□□ -0.94
HCA4P20448 YJL160CYJL160C 864 nt9.16□□□□□ -0.94
HCA4P20448 PDC6YGR087C 1692 nt9.16□□□□□ -0.94
HCA4P20448 CAK1YFL029C 1107 nt9.15□□□□□ -0.94
HCA4P20448 YGR139WYGR139W 339 nt9.15□□□□□ -0.94
HCA4P20448 YLR460CYLR460C 1131 nt9.15□□□□□ -0.94
HCA4P20448 FCY1YPR062W 477 nt9.14□□□□□ -0.95
HCA4P20448 ALD5YER073W 1563 nt9.14□□□□□ -0.95
HCA4P20448 YRF1-3YGR296W 5580 nt9.14□□□□□ -0.95
HCA4P20448 YRF1-6YNL339C 5580 nt9.14□□□□□ -0.95
HCA4P20448 YRF1-7YPL283C 5580 nt9.14□□□□□ -0.95
HCA4P20448 snR86snR86 1004 nt9.13□□□□□ -0.95
HCA4P20448 CHS7YHR142W 951 nt9.13□□□□□ -0.95
HCA4P20448 LSP1YPL004C 1026 nt9.13□□□□□ -0.95
HCA4P20448 TRP2YER090W 1524 nt9.13□□□□□ -0.95
HCA4P20448 HXT11YOL156W 1704 nt9.12□□□□□ -0.95
HCA4P20448 YJR149WYJR149W 1215 nt9.12□□□□□ -0.95
HCA4P20448 BUB2YMR055C 921 nt9.12□□□□□ -0.95
HCA4P20448 THI6YPL214C 1623 nt9.12□□□□□ -0.95
HCA4P20448 ILV2YMR108W 2064 nt9.11□□□□□ -0.95
HCA4P20448 PET18YCR020C 648 nt9.11□□□□□ -0.95
HCA4P20448 RRT14YIL127C 621 nt9.11□□□□□ -0.95
HCA4P20448 DTR1YBR180W 1719 nt9.08□□□□□ -0.96
HCA4P20448 RCR1YBR005W 642 nt9.08□□□□□ -0.96
Retrieved 100 of 7,029 protein–RNA pairs in 29.5 ms